Komagataella phaffii: PAS_chr2-1_0186
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Entry
PAS_chr2-1_0186 CDS
T01092
Name
(RefSeq) Alpha-tubulin
KO
K07374
tubulin alpha
Organism
ppa
Komagataella phaffii
Pathway
ppa04145
Phagosome
ppa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
PAS_chr2-1_0186
09142 Cell motility
04814 Motor proteins
PAS_chr2-1_0186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr2-1_0186
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr2-1_0186
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppa04812
]
PAS_chr2-1_0186
04147 Exosome [BR:
ppa04147
]
PAS_chr2-1_0186
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PAS_chr2-1_0186
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
PAS_chr2-1_0186
Cytoskeleton proteins [BR:
ppa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
PAS_chr2-1_0186
Exosome [BR:
ppa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PAS_chr2-1_0186
Exosomal proteins of other body fluids (saliva and urine)
PAS_chr2-1_0186
Exosomal proteins of colorectal cancer cells
PAS_chr2-1_0186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Hydrolase_4
Motif
Other DBs
NCBI-GeneID:
8198568
NCBI-ProteinID:
XP_002491074
UniProt:
C4QZX0
LinkDB
All DBs
Position
2:join(349435..349459,349563..350884)
Genome browser
AA seq
448 aa
AA seq
DB search
MREVINVNVGQAGCQIGNACWELYTMEHGITPDGYLQPGLEKPKGAEAGFSTFFSETGSG
KYVPRALYVDLEPNVVDEVRTGPYGNLFHPEQLITGKEDAANNYARGHYTVGRELLDDIL
DRVRKMADQCDGLQGFLFTHSLGGGTGSGLGSLLLEQFSNDYGKKSKLEFAVYPAPQVST
SVVEPYNTVLTTHTTLENADCTFMVDNEAIYDMCRKNLGIVRPTFANLNNLIAQVVSSVT
ASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPVLSKQRATHESNSVAEITAACFDPS
NQMVKCDPRLGKYMATCLLYRGDVVTRDVQTAVAHIKSKKTVQLVDWCPTGFKIGICYEK
PTQPASSELADVKRALCMLSNTTAIADAWNKIDHKFDLMYRRRAFVHWYVSEGMEEGEFA
EARENLAALERDYVELGSDSFPEEEEEY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagtaattaatgttaatgtcggacaggcaggttgtcaaatcggaaatgcttgc
tgggagctgtacacaatggagcacggaatcaccccagacggatacttgcagccaggacta
gaaaagccaaagggcgctgaagctgggtttagtaccttctttagtgaaacagggtctgga
aagtacgtgccaagggctctttacgtggatctcgaacccaatgtcgtggatgaagtcaga
acaggcccctatgggaatctgttccaccctgaacagttgattacaggtaaagaagatgca
gcaaacaactacgccagaggtcactacacagttggaagagaattgcttgatgacattttg
gaccgtgtaagaaaaatggcagaccaatgtgacggtctacagggattccttttcactcac
tctttgggtggtggtacaggatctggtctgggatctcttctattagaacagttcagtaat
gattacggtaaaaagtccaagctggaatttgctgtttaccctgctccacaggtttcaacc
tcggtggttgaaccttacaacacggttctaaccacccataccaccttggagaatgctgac
tgtactttcatggtagacaatgaggctatttatgacatgtgccgtaagaatttgggaatt
gttcgtccaacctttgctaatttgaacaatctgatcgcccaagtcgtctcttcagtaacc
gcttctttgagatttgacggttcattgaacgtggatctaaatgagttccagaccaacttg
gttccatacccaagaattcatttcccattggtctcctacgctcctgttctatctaaacag
agagctactcacgagtccaactccgtagctgaaattaccgctgcttgtttcgatcccagc
aaccaaatggtcaagtgtgaccctcgtttaggaaagtatatggctacctgtttgttgtat
agaggagacgttgtgacgcgtgatgttcaaactgccgttgcccacatcaagtcaaagaaa
actgttcaactggtggactggtgtccaactggtttcaagattggtatttgttatgaaaaa
ccaactcaaccagcctcatccgaactagctgacgtcaagagagctctttgtatgctttcc
aacactactgcaattgctgacgcctggaacaagatcgatcacaagtttgatctgatgtac
agaagaagagccttcgtccactggtacgtcagtgagggaatggaagaaggagaattcgct
gaagcaagagagaacttggctgctttggagagagattacgtggaactgggttctgacagt
ttccctgaagaggaggaggagtattag
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