KEGG   Komagataella phaffii: PAS_chr2-1_0195
Entry
PAS_chr2-1_0195   CDS       T01092                                 
Name
(RefSeq) Single-stranded DNA endonuclease (with Rad1p), cleaves single-stranded DNA during nucleotide excisio
  KO
K10849  DNA excision repair protein ERCC-1
Organism
ppa  Komagataella phaffii
Pathway
ppa03420  Nucleotide excision repair
ppa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PAS_chr2-1_0195
   03460 Fanconi anemia pathway
    PAS_chr2-1_0195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppa03400]
    PAS_chr2-1_0195
DNA repair and recombination proteins [BR:ppa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     PAS_chr2-1_0195
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 UPF0758_N
Other DBs
NCBI-GeneID: 8198577
NCBI-ProteinID: XP_002491083
UniProt: C4QZX9
LinkDB
Position
2:363991..364965
AA seq 324 aa
MSGADDGKDKTDTTSFEAILAGVKRLREQDQNKDAKQGSEKLKIPLKRLPKRSLPTPKSD
QIQNVKTTEDAAPVSSAPVTSTTTSKVIRMDNTPSNLAIRHQKKTGKTTFNSIQVNKSQT
GNPLLKHLKTVSWEFSSNIKQVDYLVNSQTFVLFLSLKYHKLHPEYIMNKIKSMNGNDTS
FTNNNLKLLLVVVDIDSHEDILRELTKTCVNNDLSLVLSWSFEEAANYIVYLKQYELSDL
SESTLINNSKQDSSSYNSLVKSVTSIRNITKTDAVNLISEFGSLRELVNANPESMSAVQG
MGDIKVNRWASVVEDQFVLNKEYT
NT seq 975 nt   +upstreamnt  +downstreamnt
atgagtggtgctgatgatgggaaagataaaacggatacaacatcgtttgaggctattctt
gccggggttaaacgtttaagagaacaagatcaaaataaagatgcaaagcaaggctccgaa
aaactcaaaattccgttgaaacggttgcctaaaagatcccttcctacccccaaatccgac
caaatccagaatgttaaaactacagaagatgctgctcccgtatcgtctgctcccgtaaca
tctactactacaagcaaagtcattcgcatggataataccccttcaaatttagctataaga
catcaaaagaaaacaggaaagacaacctttaacagcattcaagtcaacaagtcgcaaacc
ggtaacccattgctgaaacatttgaagacagtttcttgggaattcagcagcaacatcaag
caggtagactatctagtaaattcccagacatttgttttatttctgtctttgaaataccat
aagttacatcccgagtatatcatgaataagatcaagtcgatgaatggaaacgatacctct
tttaccaacaacaatttgaaactgttgctggtggtcgtcgatatcgactctcatgaggat
attttgagagaattaaccaaaacttgcgtcaataacgatcttagtttggtactgtcctgg
tcctttgaagaagctgcaaattatattgtctacctgaaacaatacgaattgagtgaccta
tcagagtcaactttgattaataacagcaagcaagactcttcgagttacaacagtcttgtc
aaatccgttacctctataagaaatatcactaaaacagatgcggtaaacttgatatctgag
tttggaagtttgcgagaattggtaaatgctaatccggagtcaatgtctgcggttcaagga
atgggtgatattaaggtgaatagatgggccagtgttgttgaagaccagttcgtgttaaac
aaagagtatacttga

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