KEGG   Komagataella phaffii: PAS_chr2-1_0223
Entry
PAS_chr2-1_0223   CDS       T01092                                 
Name
(RefSeq) RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
ppa  Komagataella phaffii
Pathway
ppa03020  RNA polymerase
ppa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PAS_chr2-1_0223
  09124 Replication and repair
   03420 Nucleotide excision repair
    PAS_chr2-1_0223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppa03021]
    PAS_chr2-1_0223
   03400 DNA repair and recombination proteins [BR:ppa03400]
    PAS_chr2-1_0223
Transcription machinery [BR:ppa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PAS_chr2-1_0223
  RNA polymerase III system
   RNA polymerase III
     PAS_chr2-1_0223
  RNA polymerase I system
   RNA polymerase I
     PAS_chr2-1_0223
DNA repair and recombination proteins [BR:ppa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PAS_chr2-1_0223
SSDB
Motif
Pfam: RNA_pol_N Chordopox_RPO7
Other DBs
NCBI-GeneID: 8198605
NCBI-ProteinID: XP_002491113
UniProt: C4R009
Structure
LinkDB
Position
2:423742..423960
AA seq 72 aa
MIIPVRCFSCGKVVGDKWDAYLRLLEEGKQEGDALDELKLKRYCCRRMVLTHVDLIEKFL
RYNPLEKKDFDS
NT seq 219 nt   +upstreamnt  +downstreamnt
atgattatcccagttcgttgtttctcttgtggaaaagttgtaggtgacaaatgggatgct
tatcttagactcctggaggagggcaagcaggaaggtgatgctctagacgagctgaagttg
aagagatattgttgtcgtagaatggtgttaacccacgttgatttgattgagaagttcttg
cgctataacccgttggagaagaaagattttgatagttaa

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