Komagataella phaffii: PAS_chr2-1_0378
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Entry
PAS_chr2-1_0378 CDS
T01092
Name
(RefSeq) Putative ATP-dependent RNA helicase of the DEAD-box family
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr2-1_0378
Enzymes [BR:
ppa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PAS_chr2-1_0378
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
90S particles
Helicases
PAS_chr2-1_0378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
8199066
NCBI-ProteinID:
XP_002491280
UniProt:
C4R0H6
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All DBs
Position
2:706001..707305
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AA seq
434 aa
AA seq
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MVKFEELGVSKWLCESLDAMKIYTPSKIQEATIPKILAGYDCIGGAKTGSGKTIAFAAPM
LTKWSEDPYGVFGLILTPTRELALQIAEQYAALGASMNIKVSVILGGGDIVQQALELQRR
PHFVVATPGRLADHILSSGEETIGGLRKIKFLVLDEADRLLSNSFGSDLERCFKVLPPPE
KRQTLLFTATVTDEVRALKEKPVPEGKLPVFVHEVESVDKVAIPATLTTNYLFIPSYVKE
AYLNAVLALEENADSTVIVFVNRTQTAELLRRTLRNLEFRVASLHSEMPQIERINSLHRF
KAGAARILIATDVASRGLDIPSVELVVNYDMPADPDDYIHRVGRTARAGRKGESLSFVTE
QDVKRVLAIEERINKKMDKYELVTDNKVIETSLHKTGAAKREALMAMEREGFGEKRKNNK
IKNAKRKNSRLQSK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagttcgaagagctgggagtcagcaagtggctttgcgagtcgcttgatgcaatg
aagatatacacgccttcaaagatccaagaagccactattccaaaaattcttgcaggttat
gattgtattggaggagctaaaacaggatctggtaaaaccattgcatttgcagccccaatg
cttacaaaatggtcagaagatccttatggtgtgtttggattaattcttacacctacaaga
gagttggcccttcaaatcgcagaacaatacgctgcgcttggtgccagtatgaatattaaa
gtttccgtaattctaggtggtggggatatcgtccaacaggccttagagctacaaagaagg
ccgcattttgtcgttgccaccccgggtagactggctgatcatattctcagcagtggtgaa
gaaaccatcggcgggctgagaaaaatcaagtttttggtattagacgaagctgatagatta
ttgagtaacagttttggaagcgacttggaaagatgcttcaaagtgttgcctcctcccgag
aagaggcaaacattgctatttacagccactgtcacggatgaagttagagctttgaaagaa
aaacctgtgcctgaaggcaaacttcctgtattcgtacatgaagttgagtctgtcgataaa
gtggccattcccgcaactttgacaacaaattatctattcataccgtcctatgtcaaagag
gcttatttgaatgctgtcttggcattggaagaaaacgcagattctaccgtcattgtcttt
gttaatagaacacaaaccgcagaacttttgagacgaactttgaggaatctggagtttagg
gtggcttcccttcattctgagatgcctcaaatagagagaataaactctttgcatagattc
aaagctggtgctgctagaatcttgattgccacggacgtagcttccagaggattggatata
ccctcagtggagttggttgtcaactacgatatgcctgctgacccagatgattatatccac
cgagtaggtagaacagcacgtgctggtcgtaagggtgaatccttgagtttcgttaccgaa
caagatgtcaaaagagtgctggccatcgaagaaaggatcaacaagaaaatggacaagtac
gaactggtcactgataacaaagttatagaaacctccctgcacaaaactggtgcagctaag
agagaagccttaatggcgatggaaagagaggggttcggtgaaaagagaaagaataacaaa
atcaagaacgcaaaacgaaagaacagcagacttcaaagtaagtaa
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