Komagataella phaffii: PAS_chr2-1_0396
Help
Entry
PAS_chr2-1_0396 CDS
T01092
Name
(RefSeq) Mitochondrial methionyl-tRNA synthetase (MetRS)
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ppa
Komagataella phaffii
Pathway
ppa00450
Selenocompound metabolism
ppa00970
Aminoacyl-tRNA biosynthesis
ppa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PAS_chr2-1_0396
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PAS_chr2-1_0396
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppa01007
]
PAS_chr2-1_0396
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_chr2-1_0396
Enzymes [BR:
ppa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
PAS_chr2-1_0396
Amino acid related enzymes [BR:
ppa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PAS_chr2-1_0396
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PAS_chr2-1_0396
Prokaryotic type
Other AARSs
PAS_chr2-1_0396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
8198864
NCBI-ProteinID:
XP_002491297
UniProt:
C4R0J3
LinkDB
All DBs
Position
2:complement(728709..730352)
Genome browser
AA seq
547 aa
AA seq
DB search
MVGAYLSSASKYFITTPIFYVNAAPHLGHLYSMLLCDFQKRWLDLKETPNYFTTGTDEHG
LKVQIAAELNKTDPRLFCDNLSNKFKHLAQISDIQYDRFIRTTDADHLATVRQFWETVWK
NGYIYKGKHSGWYSVSDETFYPESQVEQRDGKTVSTETGSEVVYESEENYFFKLSAFQSQ
LIDLYKANPQFVIPANYYSDLLKELEREPLQDLSISRPSSRLQWGISVPNDESQKIYVWF
DALVNYLTSIGYPSSRYKEFWPGTHLIGKDISRFHCIYWPAFLMAAKVSPPEKVVVHGHW
LMGGSKMSKSKGNVADPLAIGDYYGVDSLRLFLGANSILSNDCDFTERKLNDHRDLFIDK
ICNVVTRCISKSFDPARSVMSFSNEDMNLVWKRILERGWEGDLEKAAELKKSYDEIVDDA
QQLFSKIDVLMSTFTTHKSVGEIFDLMLKVNQFVNSTEPWNLKSNERLQDLSIFVALDVT
RVCLILLQPFIPGLSNKLLDMIKVESSKRTATYAAFQQDSSYGQGAKFLKGSTPPLIKVP
LRAGAYE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagcatacctgagctctgcttccaaatatttcataacaactccaatattctac
gtcaatgctgctcctcatttaggtcatctatattccatgctgctgtgtgacttccaaaaa
agatggttggaccttaaggaaacaccgaactactttactactggtactgatgaacacggt
ctcaaagtccaaatagctgcagaactgaacaagacggatccgagactgttttgcgacaac
ttaagcaataaattcaaacatctggctcaaataagcgatattcagtatgacaggtttata
aggaccactgatgctgatcatctggctacagtacgccagttttgggaaaccgtttggaag
aatggctatatttacaagggaaagcatagcgggtggtacagcgtttctgatgaaactttc
tatccagaatcccaagttgagcaaagagatggcaaaactgtcagcacagaaactggatcg
gaggtagtctacgaatcagaggaaaattattttttcaaactatcagcttttcagtctcaa
ttgattgatctctataaagcaaatccgcagtttgtcattccagctaactattactcggat
ctcttgaaagagctagaaagggagcctttgcaagatctatcaatatcgagaccaagttcc
agattgcaatggggaatttcagtcccgaatgacgagtcgcaaaagatctatgtttggttc
gatgcattagtaaactatttgacctctatcggatacccctcaagccggtacaaagaattt
tggcctggaactcatctgatcggaaaagatatttctcgatttcattgcatatattggcca
gcattccttatggctgccaaggtatctccgcctgaaaaggtagttgttcacggtcactgg
ttgatgggaggatcaaaaatgtcaaaatcaaaaggaaatgttgctgatcctttagccatt
ggtgactattatggcgtcgattctctaaggttatttctcggtgcaaattcaatattgagc
aacgactgtgacttcacagaaaggaaactaaacgatcatagagatttattcattgacaaa
atttgtaacgttgtcactagatgtatctcaaagtcttttgaccctgccagatctgtaatg
agcttttccaacgaagacatgaatcttgtctggaaacgtattttggaaagaggatgggaa
ggtgatttggaaaaagctgcagaattgaaaaaaagttacgatgaaattgttgacgatgcg
cagcaactgttctctaagattgacgttttgatgtcaacgtttactacacacaaatcagtt
ggagaaatattcgacctgatgctcaaggtcaatcaatttgtgaactctactgaaccatgg
aacctaaagtcaaatgagcgtcttcaagacttgtcaatatttgttgccttggacgtaacc
agagtttgtttgatattactccagccctttattcctggattatctaacaaattgttagac
atgattaaggtcgaaagttccaaacggacagctacctatgctgcatttcagcaggattct
agttacggtcaaggtgcaaaatttctcaagggctctacgccaccactaatcaaagtacct
ctcagagcaggtgcgtatgaataa
DBGET
integrated database retrieval system
