Komagataella phaffii: PAS_chr2-1_0410
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Entry
PAS_chr2-1_0410 CDS
T01092
Name
(RefSeq) Essential protein involved in 60S ribosome maturation
KO
K14574
ribosome maturation protein SDO1
Organism
ppa
Komagataella phaffii
Pathway
ppa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PAS_chr2-1_0410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr2-1_0410
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
PAS_chr2-1_0410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
Motif
Other DBs
NCBI-GeneID:
8198878
NCBI-ProteinID:
XP_002491311
UniProt:
C4R0K7
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All DBs
Position
2:complement(753433..754305)
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AA seq
290 aa
AA seq
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MESGLNVWPADSPPCFILPRLSRDQVHTPFKKKNPVSSFCSSQTLPKMPINQPMSQIKLT
NVSLVRMRKNKKRFEIACYQNKIQDWRSGAEKDIDEVLQIPQVFVNVSKGQVAPHDDLKK
CFGTTDTDTIIKEILNKGEIQLSEKERQANSSKYTAEVLQLVSAKCINPKTMKRYPTTMI
HKALNELKFNLTSTKPAKSHALDAIRLLVSKQLIPIARAKMKVKIVMNSKDAKASKDKLH
SLITEIESENWSSEWEAFAYIDPSNYRELFNMAKVELLEMAAINESSGTL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcggcctcaatgtttggcccgctgattctcccccatgtttcatattacctaga
ttgtcacgtgaccaagtgcatacgcccttcaagaaaaaaaatcctgtctcatccttctgc
tcatcacagactctacccaaaatgccgattaatcagcctatgtctcagatcaagttgact
aacgtctccttggtcaggatgagaaagaacaagaaacggttcgagattgcctgttatcaa
aacaagattcaagactggagatctggagcggaaaaggatatagacgaagtgctacagatt
cctcaagtatttgtaaacgtttccaaaggccaggttgctcctcatgatgacctaaaaaaa
tgttttggaactacagatactgacacgatcataaaggagattctgaataaaggagagatc
caacttagtgaaaaagaaagacaggccaactcatccaagtacacggccgaggtactgcag
ttagttagtgctaaatgcatcaaccctaaaaccatgaaaagatatccaactacaatgatt
cataaggcactaaacgagctgaagttcaacttgacgtctacaaaaccggcaaaatcacat
gcgctggacgccatcaggttgttggtatccaagcaactaatccccattgccagagcaaag
atgaaggttaagattgtgatgaactcgaaagatgctaaagctagcaaagataaacttcat
agcttgattacagagattgagtctgaaaactggtcttctgagtgggaagcatttgcatat
atagacccttcaaattatagggaacttttcaatatggccaaagttgaacttttggaaatg
gctgctatcaatgagagttccggaactttgtaa
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