Komagataella phaffii: PAS_chr2-1_0414
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Entry
PAS_chr2-1_0414 CDS
T01092
Name
(RefSeq) Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM)
KO
K14396
polyadenylate-binding protein 2
Organism
ppa
Komagataella phaffii
Pathway
ppa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PAS_chr2-1_0414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr2-1_0414
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PAS_chr2-1_0414
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PilO
RBD_DEAH11
DUF7310
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
8198882
NCBI-ProteinID:
XP_002491315
UniProt:
C4R0L1
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All DBs
Position
2:760366..760995
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AA seq
209 aa
AA seq
DB search
MSEETQDNKEQPQQSQLDSNQTESQASQQELDQWKAKMAEMEAEVNKLRELQGQQEVGSR
PENGVGTANSDSDPKFLSIEERQEIDSKSIYVGNVDFSATPGELAEHFKTCGTVNRVTIL
MDKVTGRPKGFAYVEFSDPSSVSESLVLNDSEFHGRNLKVVPKRTNMPSFMVRGRGRGRG
GRGSFGPRGRGDRGGRGGRARGRARFVPY
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaacccaggacaataaagaacaacctcaacagtcacaactggattccaac
cagacagagtcgcaggcttctcagcaagaactggaccagtggaaagctaaaatggccgaa
atggaggccgaagttaacaaactgagagaacttcaaggacaacaagaggttggatctagg
cccgaaaacggagtaggaacagccaattcggattcagatcctaagttcctatccatagaa
gagagacaagaaattgacagcaaaagtatatacgttggcaacgttgatttttcagcaact
ccaggagagttagcggaacatttcaagacttgtggtacagttaacagagtcaccattttg
atggataaggtgacgggaagacctaaagggtttgcatatgtggaattttctgaccccagt
tctgtatcagaatcattagtgctaaatgattcagagtttcatggtagaaacctaaaagtg
gtcccaaagagaaccaacatgccttcattcatggtgaggggccgtggacgaggtcgtgga
ggtagaggttcatttggacccagaggacgaggcgatagaggtgggcgaggcggtagagct
agaggaagagcaagatttgtaccttactga
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