Komagataella phaffii: PAS_chr2-1_0439
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Entry
PAS_chr2-1_0439 CDS
T01092
Name
(RefSeq) DNA helicase involved in telomere formation and elongation
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppa03032
]
PAS_chr2-1_0439
03029 Mitochondrial biogenesis [BR:
ppa03029
]
PAS_chr2-1_0439
Enzymes [BR:
ppa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PAS_chr2-1_0439
DNA replication proteins [BR:
ppa03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
PAS_chr2-1_0439
Mitochondrial biogenesis [BR:
ppa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
PAS_chr2-1_0439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
AAA
SLFN-g3_helicase
Herpes_Helicase
NPHP3_N
AAA_7
AAA_16
BRCT_TopB1_SLF1
Motif
Other DBs
NCBI-GeneID:
8198906
NCBI-ProteinID:
XP_002491346
UniProt:
C4R0P2
LinkDB
All DBs
Position
2:810169..812562
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AA seq
797 aa
AA seq
DB search
MRRMSVLGRPVLSQADIEALEVSFTDDDKSEPSFDIDDDDLILLTLKNVHRSPLRKEQAL
HPSILETQRSEKITITQTPSPDWHLFETTCIKKRKIHFPDPVSFDIEAQISTFSSSPIKA
DKKNNKVIEKQLTEPASKESPVIDLTSNEDKPELTTSTQKPSTPPRSTSAPVVTTSIGVR
NIHTVTASNAQPLNSRIHLLTQIPKRPDVFQFTQKDSQEIDDAQPKLVKPLVLSLEQEKV
IQLAKQGLGIFYTGSAGTGKSVLLRNLIKELKEIHPQGTVGVAASTGLAACNIGGQTLHS
FTGIGLGDADVTKLLTKIRRNKKVRSRWLDLEVLIIDEISMIDGNLLDKLNLIAQRLRKN
KKPFGGIQLIVCGDFYQLPPVSKTQSAKFAFEADCWDEVVPITLKLSKIFRQRGDLEFID
MLNEVRNGRISPRVEAEFQKLNRPLPVDQGITPTELYPTREEVERSNKRRLDSIPNEPLI
FKSYDTGSLKDEEQIQHMLSNFMAPKTLTLKKGAQVMMIKNVDATLVNGSVGKVLDFIDP
DTYLFYKKVSGENSELELDTIEQEIEAKILSNGKKLDASLKPSEKLISNASNLAKLDLDD
SVFSFMKCIKSKKKTVSEDLRRKLELINTLYKNSSGRRLPLVRFLTTDGETRDVLVEPEQ
FSINDIDEKPLASRVQLPLILAWSLSIHKSQGQTLNHARIDLRRVFEAGQAYVALSRATS
RKGIQVLNFNKEKIRTNPQVEMFYQKIYTVDDAVEKAKIQQKQKPLDDASAHNEAKENSN
YERMAPNDIIKHLTRRR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaatgagtgtgcttggcagaccagttttgagccaagcagatattgaagcatta
gaggtttcttttaccgatgatgacaaatcggaaccttcatttgacattgatgatgacgat
ctaattcttctaactctgaaaaatgttcatcgttcccccttaagaaaagaacaggcattg
catccttcaattttggagactcaaagatctgaaaaaatcaccatcactcaaacaccgtcg
cctgattggcacttgtttgaaacaacttgcattaaaaagagaaagattcattttccagat
cctgtctcttttgacatagaggcccagatatcaacattttcctcctctcctataaaggct
gataaaaagaataataaagtgatagaaaaacagctgacagagcctgcctccaaagagtca
cccgtgatagatttaacctccaatgaagacaagccagaactcaccactagcacccaaaaa
ccttcaacgcctccaagatcaacatcagctccggttgtcaccaccagtattggtgttaga
aatattcatactgtcactgccagcaatgctcaacctttaaatagtaggatacatctcctg
acgcaaattcccaaacgcccagatgtttttcagtttactcaaaaagactcacaagaaatt
gacgacgctcagcccaaacttgtcaaacctttggttttatcgcttgaacaagaaaaagtg
attcagttagccaaacaggggttgggaatattctacacaggatctgctggaactggaaaa
tctgtcttgctccgaaatttgataaaggaactaaaagagatccatccccaaggcactgtt
ggtgtcgcagcttctactggattagcagcttgcaacattggtgggcaaacgttgcattct
ttcacaggtataggacttggtgatgctgacgttaccaaattgttgacaaagatcagaagg
aataaaaaggttagatcaagatggcttgatttggaggtactcatcattgacgagatctca
atgatagatggaaatctgctagataaattgaatcttatagcccaaaggcttcgcaagaat
aagaagccatttggaggaattcaactcatagtatgtggagatttttatcaactaccacct
gtatccaaaacccagtctgccaagttcgcttttgaggcagactgttgggatgaagtcgtt
ccaatcactttgaaattatcgaaaattttcagacaaagaggtgatttggagttcatagac
atgttgaatgaggttagaaatggacggatctcccccagagttgaagcagagtttcagaaa
ctgaatagaccactcccagtggatcaaggaattacacctacggaactctatcccactcga
gaggaagttgagagatcaaataaaaggcgtcttgatagtattccaaatgaaccactgatt
ttcaaaagttatgatactggttcgttaaaagacgaagagcaaatccagcatatgttaagc
aactttatggctcctaaaaccctgactttgaaaaaaggagctcaagtaatgatgatcaag
aatgtggatgccactttggtaaatggatctgtagggaaagttttggattttattgaccca
gacacatacttattctacaagaaagttagtggtgagaactcggaactggaattggataca
attgaacaggagatcgaagcaaaaattctatccaacggaaaaaaattagatgctagtttg
aagccttcagaaaagttgatttctaatgcttcaaatttagcaaagcttgatctggatgac
agcgtattttctttcatgaaatgcatcaagagtaaaaagaaaactgtctctgaagatctt
aggagaaaattagagttgattaacacgctatacaagaattccagtggaagaaggttacct
ttagtgcgtttcttgaccactgatggtgaaactcgggatgtactggttgaacctgaacag
tttagtataaatgacatagatgagaaacctctagcttcgagagtacagttaccgttgatt
ttagcttggtccctttccattcataaatctcaaggacagacattaaaccatgccagaatt
gacttaagaagggtatttgaagctggtcaagcttacgttgcattgagcagagctacttca
aggaagggtatacaagtgctcaactttaataaagagaaaattcgaaccaatcctcaagtg
gagatgttttaccagaaaatatatacagttgacgatgcagtcgaaaaggcaaaaatccaa
caaaagcagaaacctcttgatgatgcttcggcccataatgaagcaaaggagaatagtaac
tatgaacgcatggctccaaatgatattataaagcatttgactagacgaagataa
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