Komagataella phaffii: PAS_chr2-1_0486
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Entry
PAS_chr2-1_0486 CDS
T01092
Name
(RefSeq) ubiquitin-60S ribosomal protein L40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
ppa
Komagataella phaffii
Pathway
ppa03010
Ribosome
ppa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PAS_chr2-1_0486
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PAS_chr2-1_0486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppa03011
]
PAS_chr2-1_0486
04121 Ubiquitin system [BR:
ppa04121
]
PAS_chr2-1_0486
Ribosome [BR:
ppa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
PAS_chr2-1_0486
Archaea
PAS_chr2-1_0486
Ubiquitin system [BR:
ppa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
PAS_chr2-1_0486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
DUF2604
Plexin_RBD
UBL_UBAC1
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
8198409
NCBI-ProteinID:
XP_002491396
UniProt:
C4R0U2
LinkDB
All DBs
Position
2:complement(891636..892022)
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLKVLASKYNCDKSVCRKCYARLPPRATNCRKRKCGHSNQ
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtcaagaccttaaccggtaagactattaccttggaagtcgagtcctcc
gacaccatcgacaatgtcaagtccaagattcaagacaaggaaggaattcctcctgaccaa
caacgtttgatttttgctggtaagcaactggaagacggtagaactctgtctgactacaac
atccagaaggagtctactttgcacctggttctgagattgagaggtggtatcattgagcca
tccttgaaggttttagcttctaagtacaactgtgataagtctgtttgccgtaagtgctac
gccagattgccaccaagagccaccaactgtcgtaagagaaagtgtggtcactccaaccaa
ctgagaccaaagaagaagcttaaatag
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