| Entry |
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| Name |
(RefSeq) Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs
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| KO |
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| Organism |
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| Brite |
KEGG Orthology (KO) [BR:ppa00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ppa03021]
PAS_chr2-1_0592
Enzymes [BR:ppa01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PAS_chr2-1_0592
5.6.2.5 RNA 5'-3' helicase
PAS_chr2-1_0592
Transcription machinery [BR:ppa03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PAS_chr2-1_0592
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:1098167..1104607
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| AA seq |
2146 aa
MDEDSWSELVRSIDLSHKEVSNDQLQEKVLASTFQYLTAQSPERIKHLFCDEKNYPIAIH
SLILFSFDTTPVLEWYTPKIDYCLNTCQRCISMFHKGRAKLRQDFIVTRGLDPQSVSRFM
DIILNWELNRILIKFRNAITSSNGGRVQVTTELSLSVVECLYGCAMLRLSPELRTLFSTI
FSDLVETQESIVPSNSPAFPGVIFFLFEGTDFERNWALSVLKSFDSRKLFIEWDLLQLEE
YEVHFYRIQDPSFYNSLNCANFWCNILPLIEYTTVDNLELKLLLPASYKPMLKEVRFQIV
SLDKVLINHVMSYLDYPLPFVLRALNIFLQKFSFKFWSVVAPHTFFNFMDAILGSPHFLK
LLKELETKNCFLSIDKLSSKTPSFNDLIEWIPAMFKSLQGPSQQQMIIKASVFIWGQRDI
NISYVIELTLPLVLDCLLIQTPIYDSTFNIDVLTQSETRVFLDNNFHVVLDSTIATESPK
LMDMCCELVRELILFDSKQYASSSYNLNLRKPVKLVNFLPKFWSYLSIKIPPSNLQFTST
VLESLKFICGVFVVGIGKQTPPPPGKQDERDNLLSIISKHNKNTELFFTQASQLLSTLVT
FDPSVLRTALNGKQASIGYWSCILSSNQELYQSAANVLYEAFDVEGRLEGTRALLELNLQ
ICLQSVVENLNTLLLLKVYELCPRTLRVLMDLLHSLCDPVTGVFIENNSYDSKTRESILS
FWNVSWDFLCLIYDRTTYWASIYSVSVLIDFARDTLDTSHLLLDGFRSFMNVVSDKPEIK
NFLFDKIMLTFHKVLTWLRLGDESLLTSCLSLVMKTLNLATELELPFDNDIIELLAKYGA
RAKKFNNKLSETQQFEILERARDFNSDLVNSIVAEAEEYRNSKFNLGSVESPISIPDEKP
VKKLQSDLSKYIKYVKEQDVPAIMPGSRIKEIARLSAKEKAERDIRIKRMGKPEKAPAAP
RPPGFNSSKKKRAEDSSDDEDEEDQNDNALDTLFHPNVEELKSKTARNLREKGKMKAQLL
SMDRPKVNAAEMERKKAEYRMRMRLNVDMNPLYAKVLQWSFKRDSRTPDNADLTTYKAIS
DSYDSVEQYQNTFEPLLLLECWQGIQQAKETGQDQPFNLVVGSKTTTGNFFDVYASVKKS
VLQDRKIGDNDLVVLAYVPDGLKNMQGLDESVPRTVVKTSEHSCLGKVREIKYSNSEFCD
VTIRVHNRNNISPFLTSRSELTGLKILQMVTIEREYSSLKGLPFYDLSDKIVKAKSAEPF
NIDDTTLQETMVKFRVNKSQAQAIAGASTSSGFSLIQGPPGTGKTKTILGIVGKVLTTRN
NLHSTPISIPGAVTSGPRKPETGVRKVLVCAPSNAAVDELVIRLREGVPGISGQMFKPKV
VRLGRSDAINSAVKDLTLEELVDAELNETARAPKADQSIREKHNKVLAERNSIREALKEV
SNLKPEEVKDLQKRYSEITKAKNELGKKLDEQREEVSVSYRNREIQRRAVQFRILSQAQI
ICSTLSGSAHDFLATMDTSFDTVVIDEACQCIELSAIIPLRYGCKRCIMVGDPNQLPPTV
LSQAAAEYKYEQSLFVRMMNVHPKSVYLLNVQYRMHPQISVFPSKEFYNGKLIDGEGTET
KNTRSWHKKIPPYCFIDVTGKESTNTSNKSLFNRAEAQAVVSLIDALLGLDRDFNFASKI
GVISPYKQQVVLLRDMILRKFGRNIGIDVNTVDGFQGQEKDVILFSCVRADETKGVGFLA
DVRRLNVALTRAKSTLLIVGHASNLSGHSLWRHLVQDSKDRNVFFTQRSLLDGGKGDVTV
GVLPSGKGKRKIEGILPPEKRKNTTANRNTDFKGQLNNEQRSKFKGQKNGKKSSKDFSNV
TPSNTGYVAPPTKGSLSMDSSAPQVKSGTLPSKPTSSSQRGQKVTSDSRLNRVDSKVLPS
NDFETPGFITGVLPSSRGSSRDKTLPPTASPLSTPSPTSLIPRPGVLPPKPPISKLPSNP
QTSATSLGPSMTSFSRPSMIQSPVVYNHPTMSQPNLAYNSHVPVNSGVYPGSSSVNLPIM
NPTLPAALPLQSVSPVSESSNDPHSVSSKSNQGYLPPQSQPSALQNRKSDRQPSSYGLNS
NIDPRSGPKLAEPTDHFVHAGEKEKKKKKKKKKDKSSDKEKYKEKA |
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| NT seq |
6441 nt +upstreamnt +downstreamnt
atggatgaagacagctggagtgaactggtcaggtcgatagacttgtcacataaggaagtt
tctaacgatcaactccaagagaaggtcctagcctcaactttccagtatctgaccgctcaa
agccctgagcggatcaagcatttattctgtgatgaaaaaaactatcctatagctatacat
tcactgatactgttttcatttgatacaactcctgttctagaatggtatactcctaaaatt
gactactgcctcaatacttgccagcgatgcatctccatgttccataagggacgcgcaaag
ttaagacaggatttcattgtcaccagaggtttagaccctcaaagtgtctctagatttatg
gacattatattaaactgggaattaaacagaatattaattaagttcaggaatgcaatcact
tcaagcaatggaggaagagttcaggttactacagagctttctttatcagtagttgaatgc
ctgtacggttgtgcaatgttaaggttgagcccagaactgcgaacgctattttccaccata
ttttcagacctcgttgagacacaagaatctattgtaccttcaaactctccagcatttcca
ggtgtaatattctttctgtttgaaggcacggacttcgaaagaaactgggccttatctgtg
ttaaaatcattcgactccagaaagctttttattgaatgggatttactgcaactggaggaa
tatgaggttcatttttacagaattcaagacccaagtttctataatagcttaaattgtgca
aatttttggtgcaatatccttccattgatagaatacacaactgttgacaatttagaactc
aaattgttacttcctgcatcttacaagcccatgttgaaagaagttcgttttcaaatcgtt
tcacttgataaagtcctcatcaaccacgtcatgtcgtatttagactatcctttaccattt
gtgctcagagcgttgaatatttttcttcagaagttttctttcaaattttggagtgttgta
gctcctcatacatttttcaacttcatggatgccattttggggagtcctcattttctaaaa
ctcctgaaagaattggagaccaagaattgcttcttatccatcgataaattgtcaagcaaa
acaccctctttcaatgatttaattgaatggattcctgcaatgtttaaatcccttcaaggc
ccttcgcaacagcaaatgattattaaagcttctgtttttatatggggacaaagagacatc
aatatttcttacgttattgagctgacactccccctcgtattggattgtctgctgattcaa
acacccatatatgactctacgttcaacattgatgttttaacacaatcagagactagagta
tttctagataataatttccatgttgttctggactcaacaattgccaccgaatctcctaag
cttatggacatgtgctgtgaattagtaagggagcttattttatttgactctaagcaatat
gcgagcagcagttataacctgaaccttcgaaagcctgtgaaattggtgaattttttgcca
aaattttggtcctacttatcaatcaagatacccccaagtaatttacagtttacatctaca
gttttggaatctctcaagtttatatgtggtgtttttgttgtaggcatagggaaacaaaca
cctccgcctccaggaaaacaggatgaaagagataacctcttgtccataatctccaagcat
aataagaacacagagttattttttacccaagcttctcaactgttgtcaacgcttgtaact
tttgatccgtcggtgctgagaactgctttgaatggtaaacaagcatccattggttattgg
tcatgcatcctctcaagtaaccaagaactatatcagagtgcagcaaatgttctttatgaa
gcgttcgatgtggaaggtagacttgaaggtactagagccttgctggaattaaatcttcaa
atttgtttgcagtcggtcgtcgagaaccttaatacactgttgcttttaaaagtatatgaa
ctttgtccaagaacactccgagtgctcatggatttgcttcattcattatgcgatccagtt
actggagtttttattgaaaacaactcctatgattccaaaacaagggagagtattttaagc
ttttggaatgtttcttgggatttcctttgtttgatctacgatagaactacttactgggcc
tccatttactccgtttctgttcttatcgactttgccagagatacattggacacatcccat
ttgttacttgacgggtttaggagtttcatgaacgtagtttcagacaaacctgaaatcaag
aactttttgttcgataagattatgttgactttccataaagttctcacatggttaagactt
ggtgacgaatcacttttgaccagctgtctgtctttggtgatgaaaacgttgaatttagct
actgaacttgaattgccgtttgataacgatatcattgagcttcttgccaaatatggagca
agggctaaaaagttcaacaataaattgagtgaaacacagcaatttgaaattctagaaaga
gccagagacttcaacagtgaccttgtgaattccattgtggcagaggcagaggaatataga
aattccaaattcaacttaggttcggtagagtcaccaatttccattccagatgaaaagcca
gtcaagaagcttcaaagtgatctctccaaatatattaagtatgtaaaagagcaggatgtt
cccgctatcatgcctggatctagaattaaagagattgctagattgtctgctaaggaaaag
gctgaaagagatatacgaatcaaaaggatgggtaaaccagaaaaagctcctgctgcaccc
agacctcctggttttaactcgtcaaaaaagaagagggccgaagattctagtgacgatgaa
gatgaagaggatcaaaatgacaacgcactggatactctttttcatccaaatgtcgaagaa
ttgaagagcaagacagccagaaatttacgtgaaaaaggcaagatgaaagctcaattgctt
tccatggatagaccaaaggtgaatgcagctgaaatggaaaggaagaaggcagaatataga
atgagaatgcggttgaacgttgacatgaacccattgtatgctaaagttttgcaatggtct
ttcaaacgagactccagaactccggataatgccgatcttacaacgtacaaagcaatttct
gactcatacgactcagttgaacagtatcagaacacatttgagcctttgcttttacttgaa
tgttggcagggtattcagcaagccaaggaaacgggacaggatcaaccatttaatctagta
gtgggcagtaaaactactactggaaactttttcgacgtatatgcttcagttaagaagagc
gttttgcaagacaggaagatcggtgataacgatttggttgtgcttgcttatgttcctgac
gggttgaaaaatatgcagggacttgatgaatctgtacctcggactgttgtaaaaacttca
gagcactcctgccttgggaaggtacgagaaatcaagtactctaattcagagttttgtgat
gttacaatcagagtgcataataggaacaatattagtcctttcttaacttcgagatcagaa
ttgactggcctcaaaattttgcaaatggtaacaattgaaagagaatactcctcgttgaaa
ggattgccattctacgatctctctgacaagattgttaaagccaaatctgctgagccattt
aatattgatgacacaacgttgcaagaaacgatggttaagtttagggtcaataaatctcaa
gcccaagccattgctggtgcctcaacatcgtcaggcttctcgctcattcagggtcctccg
ggtacgggtaagactaagaccatccttgggatagtaggcaaagttttaaccactcgcaac
aaccttcatagtaccccaatttcaattccaggagcggtgacttctggacctagaaagcct
gaaaccggagtaaggaaggtcttggtatgtgccccttcgaatgccgcagttgatgaactg
gtcattagattgcgggagggtgttccgggaatttcaggacaaatgttcaaacctaaggtg
gttagattaggtaggtctgatgctataaactcggcggtcaaagatttaactctggaagag
cttgtagacgctgagctcaatgaaacggctcgtgctccaaaggctgatcaatccattaga
gagaaacacaacaaagttctagcggagagaaattccattcgagaggctctaaaagaggtt
tctaatttgaaaccagaggaagtcaaagatttacaaaaaagatacagtgaaattaccaaa
gccaagaatgaactgggaaagaaactggatgagcaaagagaggaagtttctgtgtcttat
agaaatcgggaaattcagagaagagcggttcaatttcgaattctatctcaggcacagatt
atttgttccactttatccgggtctgcgcacgattttctggcaacaatggacacttctttt
gatactgtggtcattgatgaagcatgtcagtgtattgagctttcggctattattcctctg
cgatacggctgtaaacgttgtattatggttggtgacccaaaccagttgcctcctactgtc
ttgtctcaggctgctgcggagtataagtacgagcaatcactttttgtcagaatgatgaat
gttcatccaaaatcggtttatctgctaaatgtgcagtaccgtatgcatccccaaatttct
gtttttccatcaaaagagttttacaatggaaaactcattgacggtgaaggtactgagaca
aagaataccaggagctggcacaaaaaaatacctccctattgcttcattgatgtgacaggt
aaggaaagtaccaatacgagcaataaatcgttattcaacagggctgaggcacaagctgtg
gtctctttgattgacgcgctattggggcttgatcgtgatttcaactttgcttcaaaaatt
ggagttatatcaccctataaacaacaagttgtactcctcagagatatgatacttcggaaa
tttggcagaaatataggaatagatgtcaacactgttgatggattccaaggtcaagaaaaa
gacgttattttgttttcatgtgttcgtgccgatgagactaaaggagttgggttcttggca
gatgtgagaagactaaacgtggcactaactcgtgccaagtctactcttttaattgtagga
catgcaagcaatttatccggccattcgttatggaggcatttagttcaagattccaaagac
cgaaatgtgttttttactcaaagatccttgctagatggaggtaaaggtgatgttacagtc
ggggtattaccatctggaaagggaaagcgaaaaatagaaggtatcctacccccagagaaa
agaaagaatactacagctaatcgtaacactgatttcaaaggtcaactcaacaatgaacaa
cgttcaaagttcaaaggtcaaaaaaatggtaaaaagtcatccaaagatttttccaatgta
acacccagtaacactggttacgttgctcctccaactaagggatccttatcgatggacagt
tctgctccccaagtcaaatcaggaacattacctagcaaaccgacgtcaagttctcaaaga
ggacagaaagtgacatctgattctagattgaatcgagtagattccaaagtgttaccaagt
aatgattttgaaactcctggtttcattactggagtcttaccaagctccagaggtagttct
agggataaaacgttgcctccaactgcaagtccgctaagcactccttctccaacttctttg
ataccaagacctggtgtgttacctccgaaaccaccgatatcgaaactgccttcaaatcca
cagacttctgcaacatcactgggaccttcaatgacctctttcagtcgtccttcgatgatt
cagtccccagttgtatacaatcatcctaccatgagtcagccaaatctggcctacaattcc
catgtgccagtcaactccggggtttacccaggttcgtccagtgtaaatcttccaatcatg
aacccaacattgccagcagctctacctctgcaatctgtatcccctgtttcagaaagctca
aatgatccacactcggtatcttcaaaaagtaatcaaggataccttcctccgcaaagtcag
ccatccgccttacaaaatcgaaaatctgatcgccagccttcatcttacggattaaacagt
aatattgatcctcgttcagggccaaagttggctgaaccaacagatcatttcgtacatgct
ggagagaaggaaaagaagaagaagaagaagaagaagaaggacaagagtagcgataaagaa
aaatacaaagaaaaagcataa |
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