Komagataella phaffii: PAS_chr2-1_0655
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Entry
PAS_chr2-1_0655 CDS
T01092
Name
(RefSeq) Nucleolar protein, component of the small subunit (SSU) processome
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr2-1_0655
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PAS_chr2-1_0655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_2nd
EIF3I
ANAPC4_WD40
WDR55
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_EML
WD40_Gbeta
Beta-prop_TEP1_2nd
WDR54
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
8199269
NCBI-ProteinID:
XP_002491580
UniProt:
C4R1C6
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Position
2:1237820..1239367
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AA seq
515 aa
AA seq
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MSVEGTRNVGSSSLDTTGKPKYGRNKQLGAKLKRYGRERKEALEAARRTDILLQEEPGFL
EPENEMEKTYEITQKDLRENVDIGTAAKGFELKLKDYGPYSIDYSRNGRELLIVGKKGHV
ASIDWKKGQLNTELHLNETCHAIKALHNDQFFAVAQKKYTFIYDKLGTEIHRMKQHIEAT
SLEFLPYHFLLVTAGQTGVIKYQDVSTGTLVAELKTKMGPTLSMTQNPWNAVINCGHSNG
AVTLWSPSMPTPLVKIQASIAPVRALAVNREGNYMAVASSDRTVKIWDIRTYKEVDTYIT
PIPATSLDISDTGLLSVGWGPHTTVWKDIFKKRQDHPYMTHQIRGSRVQSTKFVPFEDIL
GVGHASGFSSLIIPGAGEANFDAWEINPYESAQQRQQNEVRALINKLQPEMITLDPNVIG
TVDTAVKQKSMLPDDDEEKDAEDKEPGDEEPKLDRYVPDKKGKQTALQRHMRKKTQNDLE
ERRLRTERNLKREQELNGRQDHGEELQNPALDRFK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgaaggaactaggaatgtgggctcctctagtttggataccacaggaaaacct
aaatacgggagaaacaaacaacttggtgccaaactgaaacgttatgggagggaacgtaaa
gaggctctggaagctgcccgtagaacggatatactgttgcaggaagaacccggtttctta
gagccagaaaatgaaatggagaaaacatatgaaataactcaaaaggatttaagagaaaat
gtagacattggtaccgcagcaaaggggtttgagttgaagttgaaagattatggtccgtac
agcattgattacagcagaaacggtagagagctgttgatcgtgggtaagaaaggccacgtt
gccagtatagattggaaaaaggggcagttaaatacggagctgcatctgaacgaaacatgt
catgccattaaagctttgcacaatgatcaattttttgcagtggcacagaaaaaatacact
tttatctacgacaaattaggaactgaaattcatagaatgaaacaacatattgaagccact
agcttggagtttttgccttatcacttcctcttggtcactgctggtcaaacaggagtcatt
aaataccaggatgtatcgaccggtactctagtagcagagctaaaaacgaaaatgggacca
acactatcaatgactcaaaatccttggaatgcagtcattaattgtggtcactccaatgga
gcagtcaccttatggagtccctcgatgccaaccccgctggtgaagattcaagcttctatt
gctccggttagagctttggcggtcaacagggagggaaattatatggcagttgccagttct
gatagaacagtaaaaatttgggatattcgaacctataaagaggtggacacttacataaca
cccattccagccacctctctggacatatctgatactggtttgctgtcagttgggtggggt
ccacacacaactgtttggaaagatattttcaagaagagacaagaccatccttatatgaca
catcaaatcagaggttcgcgtgtccaaagtacgaagtttgttccatttgaagatatattg
ggtgtaggtcatgcctctggcttttccagtcttatcatccctggggcaggtgaggctaac
tttgatgcttgggagatcaatccttacgaatctgcccagcaaagacaacaaaatgaggtc
cgtgctcttattaataagctacagcccgaaatgattacattggatcctaacgtgattggt
actgtagataccgccgtgaagcaaaaaagcatgctacccgatgacgacgaggagaaagat
gcagaagataaagaacctggcgatgaagaaccgaagttggatcgttacgttcctgacaaa
aagggtaagcaaacagctctgcaacgtcatatgcgcaagaagactcagaatgacctagaa
gaaagaagactccgtactgaaagaaatttgaagagagagcaggaattaaatggaagacaa
gaccatggcgaagaacttcagaatccagcactagacagattcaaatag
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