Komagataella phaffii: PAS_chr2-1_0662
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Entry
PAS_chr2-1_0662 CDS
T01092
Name
(RefSeq) Large subunit of the nuclear mRNA cap-binding protein complex
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
ppa03015
mRNA surveillance pathway
ppa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PAS_chr2-1_0662
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr2-1_0662
03015 mRNA surveillance pathway
PAS_chr2-1_0662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr2-1_0662
03041 Spliceosome [BR:
ppa03041
]
PAS_chr2-1_0662
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
PAS_chr2-1_0662
Spliceosome [BR:
ppa03041
]
Common components
Common spliceosomal components
Cap binding complex
PAS_chr2-1_0662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
8199276
NCBI-ProteinID:
XP_002491587
UniProt:
C4R1D3
LinkDB
All DBs
Position
2:complement(1257187..1259883)
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AA seq
898 aa
AA seq
DB search
MSGIKREREQDDSGQDEHAPLQESFKRARVVNDESRVVKSLCIQLSKIGENPDAYANDSI
YSAVPFASDIGSDTFRDAILRFAKAFVLEQPHKLFHFSGVVLLANSKNEKVGLFLIEYIH
QQIQDLLNGTNKDSSNVGKFTKIKAYLRFLASLLPMISTDSVYNIFSQFLKLSLTVKDSN
LGQLLYFIVTSSIPFIVASNQGSEEYKEIANKLIEEASAYSDETIAPNDLLLVFQSLNGS
SSDLPYEPKLLVNLILPAVKTLQSGNWENLPFIDTYSKVLPEIEKSEAPIAKHSIPQFNI
AEYSEYPMVGSVEQLWKHPRTLFEAHPESSTKNNNKFQTKPPVESYLALLLRDQVQDLVV
SMEYNRFVVSAQLLLFSKFYKEKLFCKSLSSPQKLSILCDLLNDPDSATSLNSEGDSNVA
LLIDEVQQNIKDGYVSTWKIEDVITESVLDLMLHLPKLDFPPAVYYGTLLVECCNKDLKQ
ISRTPGNQTSAITKSVGALIEYLYKQNKFLDYSLRLLYLDWITIQFSNFEFEWRWEDWAN
DEERLRASKFHPNAILIRNLIGKEVRMASVATIRKTLPEEFHRYLDLSIYSKDRMAQDTK
DIFGELSSLFTKDVETYENGSIKVKDEDIELTDSFLFINEEHPFMNDCIDVYDNLHQSDV
SVEQFSQIIADLKTKLQQHSAFSINSDKYIIMLLIQATCVTGGRSLSIFNRALGVSKDKI
RAVFDTLIDDKSLLNSWIIDSVLILWNHEPRIGYLLIEKLCHEKFITASSIVDSVFSYES
SLPMISQFYTIELVNRLFESHGEEKEFLFSIFKNFITSMNSLIKSLGITDVISAPAEDEE
LGEVNELKWGYVQLCSLLKSLLRDHFASFFPLRDQLEEELTIEHEPTKKFILSILGDA
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtattaaacgagagcgagagcaagacgacagtgggcaagatgagcatgctcct
ctccaagagtcattcaaacgggctcgcgttgtcaacgacgaatcgagagtcgtaaaatcc
ttgtgtatccaattgtccaagattggtgagaaccctgacgcttatgccaacgatagtatc
tattctgcagtaccatttgcttcagacattggctcagacacatttagagacgccattttg
cgttttgcaaaggcattcgtacttgaacaacctcataaattgttccatttttcgggcgtt
gtcctgcttgccaactccaaaaacgagaaagtgggtctcttcttaattgaatacatacat
cagcagatccaggatcttttgaacgggactaacaaggactcctccaatgttggtaagttc
actaagatcaaagcctatttgaggtttttggcgtcattgttaccaatgataagcacggat
tcagtttacaatattttttctcagtttttgaaactttccctcactgtgaaagattctaat
ttgggtcaattgctgtactttattgtcacctcatccattccattcattgttgcatcaaat
cagggttcagaagagtacaaagagattgctaacaaactgatagaggaagctagtgcgtat
tcagatgaaacaattgctcctaatgacttattactcgttttccagagtttgaacggctca
agttctgatttgccttatgagccaaagctattggtgaatttgattcttccagctgtaaag
accttacagagcggtaactgggagaatctaccttttattgatacctactcaaaggttttg
ccagaaattgaaaaatccgaggccccaattgctaaacattccattcctcagttcaacata
gctgagtattctgaatacccaatggtgggctccgtggaacagctctggaagcatcctcgt
acacttttcgaagctcatccagagtcttcaacgaaaaacaataacaagtttcaaactaaa
ccgccggtagaaagttaccttgcccttttattgcgggaccaagttcaggatttggttgtg
tccatggagtacaatcgtttcgttgtctctgcccaattattactgttttccaaattttat
aaagagaaattgttttgcaaaagtctgtcttcgccccaaaagctaagcatactgtgcgat
cttctaaacgatcctgattctgccaccagtctgaacagtgagggagatagcaatgttgcc
ctattgattgatgaagtccagcaaaacatcaaagacggatacgtcagtacttggaagatt
gaagatgtcatcacagaaagtgtgttggatctgatgctgcaccttcccaagctagatttc
ccgcctgctgtctactatggaacgcttttagtggagtgttgcaataaagatctaaaacaa
atttctcgtactccaggaaatcagacttcggccattacaaagtcagttggtgcattaatt
gagtacctttataagcaaaacaaattcttagattactctctcagactgctttacctagac
tggattacaattcagttcagtaattttgagtttgagtggagatgggaagattgggcaaat
gacgaggaaagacttagagcttccaagtttcaccctaatgcaattttgatcagaaattta
ataggcaaagaggtgcggatggcgtctgttgctaccattagaaagacgctccccgaggag
tttcatcgctatctggacctttccatctactctaaggacagaatggcacaggatacaaag
gacatatttggggagctatcatccctatttactaaagatgttgagacatatgagaacggc
tcgattaaggtcaaagacgaggacattgaactaactgattcatttttgtttattaatgaa
gagcaccctttcatgaatgattgcattgacgtttacgacaatctgcatcagtctgatgta
tctgttgaacagttttcacagataatcgctgacttgaaaacaaagttgcaacagcattca
gcgttttctattaactcggataaatacataataatgctgctgattcaagctacatgtgtt
acaggtggacgttcattgtcgatcttcaaccgagcccttggcgtatctaaggacaaaatc
cgtgcagtattcgatactttgatagatgacaaatcattgctgaatagctggataatcgat
tctgtcttaattctttggaatcatgagccaagaatagggtacctattgatagaaaaactg
tgtcacgaaaagtttatcactgcctccagtatagtcgacagtgtcttcagttatgagagt
tcgttgccaatgatctctcaattttacacaatagagctggtaaatcgactatttgaaagc
cacggggaagaaaaagagttcctgttttctatattcaaaaacttcatcacatctatgaat
agccttataaagagtctagggatcaccgatgtcatcagtgccccagcagaagacgaagaa
ttaggagaggttaacgaactgaaatggggatacgttcagttatgctcgttgttgaagtca
cttttgagggatcatttcgccagtttctttccgttgagagatcagctagaggaggagttg
acaatcgagcacgaacccaccaagaagtttatcctatccattctcggcgatgcttaa
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