Komagataella phaffii: PAS_chr2-1_0678
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Entry
PAS_chr2-1_0678 CDS
T01092
Name
(RefSeq) Protein involved in the transcription of 35S rRNA genes by RNA polymerase I
KO
K15218
RNA polymerase I-specific transcription initiation factor RRN6
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr2-1_0678
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
PAS_chr2-1_0678
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn6_beta-prop
Rrn6_HB
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
8199291
NCBI-ProteinID:
XP_002491605
UniProt:
C4R1F1
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Position
2:complement(1291257..1293500)
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AA seq
747 aa
AA seq
DB search
MFFPHKQTGVQLTYGVDAIQYDPTNKTKLWDFGCLRDQKLHLYKIDGSTIRPKQMATKPY
NIKGRKKVLDQLHNDIYIPDTIVYNLDSESAVFNSTSRFDPTISDLVAPTRFESSNRNEV
VAHVSGSSSSVLIVSQIAYEAAVLVESLGSNPQLEHFTKLPILTNLTTLDFISPIKQISW
ARLKDADGKVFPILSVRTVRSVQLMEIHNTKDLSIICHFDSSEYFEGDLSDFAFNRKNNK
QFSIMDNDGNLKCFELSNSILTEKGGCTIYDPMELSNYKQSLFVDDKSLFIWCRSSLYHY
NFKTMTCIVELTSWSKLLFVEHAEGYLFVLTTKELIVVDSFTFERLFSWKHYLRDHDMSL
KLHLYQVDGRFMCFLYSGCHSVVEILQLGFTKSSHQFHLLNDPQYITLESSDSVRSLSVL
KIPQENNDSNKSHQLTIFIIFYVNLNNEFAFALFSPTPDLKMEDDEQLEVLPYLSQSELN
SRTSKSPLSLSEVNRIFENCLPSFGDVNSVHIIQDYAYALGEYLDSFVKSNNDSRLKCLG
KVIPQPKYIDDFEELDSMINQLYFHFENSNLLFDISNTSMLKPIFGPSFQYSMTSVQHFI
KCLWTLPPEASKEVSQPFVETCNKITQFVGLNMILVRNIGAEDTIPDLSLESWEDLVSDW
DNEYDNSLKTSKQQKINPKKAFTPVQSQIPTINLSQKQKNKNTNSQLSFSQLTQKPHSQT
QSQVNSQRASSQSQQAKKRKKRLGGFA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgttttttccacataaacaaacgggagttcagcttacttatggtgttgatgcaattcag
tatgatcctaccaataaaacgaaactttgggattttggctgtttgagggatcaaaagctg
cacctttacaagattgacggatcgaccattagaccaaagcaaatggccaccaaaccatac
aacatcaagggcagaaaaaaagtgcttgatcaattacacaatgacatttatatacctgat
actattgtctataatctcgattcggagtcagcagtattcaattccacctcacgatttgat
ccaacgatatcagaccttgtggctccaacaagatttgaatcttctaatagaaatgaagtg
gttgcacacgtgtcaggctcttctagcagtgtgcttatagtctctcaaatagcctatgag
gctgcagttttggtggaaagcttaggctcaaaccctcaacttgaacattttaccaaactt
cctattttgacaaatttgacaactctcgatttcatatccccgattaagcagatcagttgg
gcacgattgaaagatgctgatgggaaggtctttcccattttatcggttagaacagtccga
tctgtccagctcatggaaatccataacactaaagatctatctattatatgccattttgat
agcagtgaatactttgaaggagatctttcagattttgcattcaaccgaaagaataacaaa
caattctcaataatggataatgatgggaatcttaaatgttttgaattgtctaattctata
ttgaccgaaaagggaggatgtactatttatgacccaatggaactttccaactacaaacaa
tcactttttgtcgatgataaatctttgtttatctggtgtcgttcatctttatatcattac
aatttcaaaacaatgacatgtattgttgagttgacgtcatggtcaaagttactattcgtt
gaacatgcggagggttatctgtttgtattgacaactaaggaactgatagtggtcgactca
ttcacctttgaacgtttattttcttggaaacactacctcagagaccatgatatgtccttg
aaacttcatctgtatcaagttgatggtcgattcatgtgctttctttattcgggttgtcat
tctgtcgttgaaatactgcagctcggtttcaccaaatcaagccatcaattccatctgctg
aatgatccacaatacataacgctggaatcctcagattcagtgagatcactctccgtgctt
aaaattccacaggagaacaatgactccaataaatctcatcagttgaccatattcattatt
ttttatgtcaacctgaacaacgaatttgcgtttgcattattttccccaacacctgatttg
aagatggaagatgatgaacaattggaggtcttaccgtacctgagccaatcagaattaaac
agtaggacatcaaagtcacctctttccttgtcagaggtcaatcgcatttttgagaattgt
cttccttcttttggggacgtaaattctgttcatataatccaagactatgcctatgctttg
ggagagtatttggactcatttgtaaaatcgaacaacgactctcgcttgaagtgtcttggt
aaagttatacctcagccaaagtatattgatgattttgaggagttagactccatgattaat
cagctctactttcattttgaaaactcaaatttgttgtttgacatatcgaatacttcaatg
ctcaagccaatttttggaccaagttttcagtattccatgacctcagtccagcatttcatc
aagtgcttgtggactcttcctccagaagcctcaaaagaagtatctcaaccatttgttgaa
acttgtaacaaaataacccagtttgttggtctaaacatgattcttgtccgaaacatagga
gctgaagataccattccagacctgagcctagaatcatgggaagatctggtctctgattgg
gataatgagtatgataattcactcaaaacttctaaacagcagaagattaacccaaaaaag
gccttcacgccagtgcaatcacaaattccaaccatcaatctctcacagaaacagaaaaat
aagaacactaactcccaattatcattttcccagttaacgcaaaaaccacactcgcaaacc
caatctcaagtaaactctcaacgggcgtcctcacaatcgcagcaagctaagaaaagaaaa
aagagattaggaggttttgcgtag
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