Komagataella phaffii: PAS_chr2-1_0679
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Entry
PAS_chr2-1_0679 CDS
T01092
Name
(RefSeq) Tryptophan synthase involved in tryptophan biosynthesis
KO
K01694
tryptophan synthase [EC:
4.2.1.20
]
Organism
ppa
Komagataella phaffii
Pathway
ppa00260
Glycine, serine and threonine metabolism
ppa00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ppa01100
Metabolic pathways
ppa01110
Biosynthesis of secondary metabolites
ppa01230
Biosynthesis of amino acids
Module
ppa_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PAS_chr2-1_0679
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
PAS_chr2-1_0679
Enzymes [BR:
ppa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
PAS_chr2-1_0679
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
PALP
Motif
Other DBs
NCBI-GeneID:
8199292
NCBI-ProteinID:
XP_002491606
UniProt:
C4R1F2
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Position
2:complement(join(1293942..1296013,1296066..1296111))
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AA seq
705 aa
AA seq
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MTTNLKRAFEKAKKQNRSALITFVTAGYPTINDTVPILQGLQAGGVDIIELGIPFSDPIA
DGPTIQAANTKALENGVNIDICLDIVKQARAKGVSVPIVLMGYYNPILAYGEQKMIEATK
IAGANGYIICDLPPEEAVKFRGYCAKQGLSYIPLVAPATTDERLDVLSKISDSFIYVVSR
MGTTGAQTKMSDTLPQLVKRVKSFAGSSPIAVGFGVSTREHYLDVGASSDGVVIGSKLIN
VIDAAPESLRADAAKKFVREILGRTDDTTITDSLSDNDNEIPYQEIATEETQFNEVHKCN
PHFGQFGGQYVPEALHTCLAELEKGFDAAVADPEFWKEFKSLYPYIGRPSSLHRAERLTE
YAGGAQIWLKREDLNHTGSHKINNALAQVILARRLGKNRVIAETGAGQHGVATATAAAKF
GMKCTVFMGAEDVRRQALNVFRMRILGASVVAVQEGTRTLRDATSEAFRFWVSNLETTHY
VVGSAIGPHPYPTLVRTFQSIIGSETKEQFKELNDGKLPDAVCACVGGGSNSTGMFSPFE
KDESVKLYGFEAGGDGIDTPYHSATLTAGKPGVFHGVMTYVLQDNDGQIHDTHSVSAGLD
YPGVGPELAAWKANGRAQFSAVTDAQALEGFKILSQLEGIIPALESSHAIYGALQIAKTM
SSDQSLVINVSGRGDKDVQSVAEILPKLGPQIGWDLRFSEDITKE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaatttgaaacgtgcctttgaaaaggctaaaaagcaaaaccgtagtgcttta
atcacgttcgtcactgctggttaccctactattaacgacactgtccccattttgcaagga
ctgcaagctggtggcgtggatattattgagctgggaattcccttcagtgacccaattgct
gacggtcctaccattcaagctgccaacaccaaagcattggagaatggtgttaatatagat
atctgtttggacattgttaaacaagccagagctaaaggtgttagcgttcctatcgtctta
atgggctactacaatccaattttggcttatggagaacaaaaaatgattgaggccaccaaa
atagcaggtgcaaacggttacatcatttgcgacctgcctcctgaagaagctgttaaattt
agaggttattgcgctaagcaaggtctaagttatattcctttggttgctcccgctaccacc
gatgagagattggatgttctgagcaagatctcagattcattcatctatgtcgtttctaga
atgggaaccacaggtgcacaaacaaaaatgtctgacacattgcctcaattggtgaagaga
gtaaaaagctttgcggggtcaagcccaattgctgtaggatttggtgtcagtactcgcgag
cattatttggatgttggggcttcttctgatggtgttgtcatcggaagtaagttaatcaac
gttattgacgcagcacctgaaagcttaagagctgatgctgcaaagaagttcgtcagagaa
attcttggacgtacagatgatactactattactgattctttgagtgacaatgacaacgag
attccatatcaagaaattgcaactgaggaaactcagttcaacgaggttcacaaatgtaac
cctcattttggacaatttggtggtcagtatgtacctgaagctttgcacacttgtttagca
gaactagagaaaggctttgatgccgcggtggctgatccagaattttggaaagagtttaaa
tctctttacccctatattggaagaccatcttcccttcaccgcgctgaaagactaactgag
tacgctggtggagcccaaatctggttgaagagagaagacttgaatcatacagggtctcat
aaaatcaacaatgctttggctcaagtaattcttgctcgtcgtctaggcaagaatcgtgtt
attgctgagactggtgctggtcaacatggtgttgcaactgctactgctgctgccaaattt
ggtatgaaatgcactgtttttatgggagcagaagacgttcgccgtcaagccctcaatgtt
ttcaggatgagaatcctaggtgcatctgttgtggctgtccaggaaggaacaaggactctt
cgggatgccacttctgaagccttcagattctgggtgtcaaatcttgaaaccactcactac
gttgtaggatccgctattggacctcatccatacccaacattagtgagaacttttcaaagt
attattggaagcgaaactaaagaacagttcaaggaactgaacgatgggaagcttcctgat
gccgtttgtgcttgtgttggtggagggtccaactctacaggtatgttctcaccatttgaa
aaagacgaatctgtaaagctttatggatttgaagccggtggagatggtattgatacacct
taccattcggctactttgactgcaggtaagccaggtgtgtttcatggagttatgacttat
gtactacaagataacgacggccaaattcatgatacacactctgtttcagctggtttggac
taccctggagttggtcctgaattggctgcctggaaagcaaatggtagagcccaattttcc
gctgtaactgatgcccaagcattagagggattcaaaatcctgtctcaattggaagggatc
attccagcactagagtctagtcatgcaatctacggcgcattgcaaattgcaaagactatg
tcttcggaccagtccttagttattaatgtatctggaaggggtgataaggacgtccagagt
gtagctgagattttacctaaattgggacctcaaattggatgggatttgcgtttcagcgaa
gacattactaaagagtga
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