Komagataella phaffii: PAS_chr2-1_0709 Help Entry PAS_chr2-1_0709   CDS       T01092                                  Name (RefSeq) Putative RNA helicase   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism ppa  Komagataella phaffii Pathway ppa03018   RNA degradation Brite KEGG Orthology (KO) [BR:ppa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PAS_chr2-1_0709  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ppa03019]     PAS_chr2-1_0709 Enzymes [BR:ppa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      PAS_chr2-1_0709 Messenger RNA biogenesis [BR:ppa03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      PAS_chr2-1_0709   mRNA degradation factors    3'-5' decay     Ski complex      PAS_chr2-1_0709 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N DEAD Ski2_beta-barrel MTR4-like_stalk DEXQc_Suv3 Helicase_C ResIII MTR4_beta-barrel Motif Other DBs NCBI-GeneID:  8198327 NCBI-ProteinID:  XP_002491637 UniProt:  C4R1I3 LinkDB All DBs Position 2:complement(1346342..1350043) Genome browser AA seq 1233 aa AA seqDB search MREIDDILQEIHDLSLNKVDLPPDTQTKFQFPSVTEEEEINDLKKQYLTPSDQIPPDLLK EFLIIPDESDQKLKFYQALVKIPPFMDRTKIKFKRKGIEGKIVGYEEALDLSGDNLTSSN SFSLHRKPAENGSSIRGQTTNLPFLPGGLVSKAVKDTESINNLLHRDDQGLFDIPLGFER GLQLEKAGDTELVDELSKLPESNEETLENQIPSGDVELLDPETLEEDAIQEGDEIDALLP SDISFSKRPKTERPQAARQWAHLVDLDHKLENFHELVPNMARTWPFELDTFQQEAIYHLE KGDSVFVAAHTSAGKTVVAEYVIAMANINMTKAIYTSPIKALSNQKFRDFKHDFEDIDVG LITGDVQINQEANCLIMTTEILRSMLYRGADVIRDVEFVIFDEVHYVNDIDRGVVWEEVI IMLPEHVKIVMLSATVPNTMEFASWVGRTKQKDVYVISTPKRPIPLEIFVWAKSDLFKVV DSNRNFLEKNFQAHSDVLVKPKKEVTGSQAGNRGGRGNARGASRGGRGSSSTVSSRGRGG SANVGTRFTKRDGPNKKTWTNLVQYLRSHDLLPSVIFVFSKARCEEYADSLQGVNFCTGS ERSRIHMFIDKAVSRLKKEDRELPQIMKMREMLSRGIAVHHGGLLPIMKEVIEILFAKTL IKVLFATETFAMGLNLPTRTVVFSELRKHDGTGFRNLLPGEFTQMSGRAGRRGLDTTGTV IVMSYNEPLESKPFQQITLGVPTKLVSQFRLTYNMILNLLRIEALRVEEMIKRSFSENTT QSGLKENEKEIIELQKKIAEISQAGCQECDPAKLKEFSTAICDYTKLTGELIRLSLEIPL HRKRFRRGMLFIYTDADGFPAPAFLYDIKMSDSLFVALVFDIERCEENNTGLPYIPESPS FIKNTIPKWKFKGNFRFTTIPFNKVQYVTRFVLQVLLKSIIRMEPESIEKAEEQILQLLH FYKKFEEYNWSASLTIPQNDLYKKIQDYRKIIANAPVIQCPSLREHYIQIKDLDSLRSRL ITLKSLVSDDNMTLLPDYEQRLKVLNELEFVDDHLNVVLKGRIACEINSGWELALTELLL DNFLADFDPEEIVALLSAFVYEGRTRDDEEPALTPRLEKGKAKIRDIVSHLLEIFQDKQV SLSAEEESFLEAKRFNLVNVVYEWAKGTSFSDIMKLSSEAEGTIVRVITRLDEVCREVKS AALIIGDSALHDKMSEAQEKIKRDIVFCASLYL NT seq 3702 nt NT seq  +upstreamnt  +downstreamnt atgagggaaatagatgatatactacaggagatacatgatctatctttgaataaggttgat cttcctcctgatactcaaacaaagtttcagtttccgtcagttacggaagaagaggaaatt aacgatcttaaaaaacagtacttaactccatctgaccagattcctccggatttgttgaag gaattcctaataataccagatgaatcagatcagaagctcaagttttatcaggcactggta aagataccaccgtttatggatagaaccaaaataaaattcaagagaaagggtatcgaggga aaaattgttggatatgaagaggccttagatctttcaggagataacctaactagtagtaac tctttcagtcttcatagaaagccagcggaaaatggatcttcgatacgaggacaaactact aatttgcctttcctgcctggtggcttagttagcaaagcagtgaaagacacagagtctatc aacaacctattgcatagagatgatcagggccttttcgatatccccttgggatttgagaga ggtctccaattagagaaggcgggtgatacagaattggttgatgagttatctaagttacca gagtctaatgaggaaactttggagaatcaaataccatccggcgatgtcgaattactagac cccgagacacttgaggaagatgccatccaagaaggtgatgaaatcgatgccttattacct tctgatattagctttagcaagaggccgaaaacagaacggccgcaagccgctcggcaatgg gcccaccttgtggatttggatcacaaattagaaaatttccacgagctggtaccaaacatg gcacggacttggccatttgaacttgacacatttcaacaagaagcaatctatcatcttgag aaaggtgattcagttttcgttgctgcgcacacatctgctgggaaaacagttgttgcagaa tatgtgattgccatggccaatataaatatgacaaaggcaatttatacttcgcctatcaaa gctctgagcaatcaaaaatttcgtgatttcaagcatgattttgaagatattgatgtcggt ttgattactggtgacgttcagatcaaccaagaagcaaactgcttgattatgacaactgaa atattaaggtccatgttgtacagaggagcagacgtgatccgtgatgtggaatttgtcatt tttgatgaggttcattatgttaatgacattgacagaggggtggtttgggaagaagttatt attatgctgccagaacatgtcaaaattgtcatgctctctgctactgtgcctaacaccatg gagtttgcctcatgggttggaagaactaagcagaaagatgtttacgttataagcactcca aaaagacctattcctttggaaatttttgtgtgggcaaaaagcgatctttttaaagttgtt gattctaacaggaactttttggagaagaactttcaagcccatagtgacgttttagtgaag cctaaaaaggaggtcacaggttcccaggccggtaaccgagggggccgtggaaatgctaga ggtgcttctagaggcggtagagggtctagttctactgtttcctctcgtggaagaggaggt agtgccaatgtgggtaccagatttacaaaaagagatggcccaaacaaaaagacttggact aatcttgttcagtatttaagatcccatgatcttcttccttcggtaatctttgtgttttcc aaagctagatgtgaagagtacgctgatagtcttcaaggtgtcaatttctgtactggttcc gaaagatcccgtattcatatgttcattgacaaagcagtatctcgacttaaaaaagaagac agagagcttcctcaaattatgaagatgcgtgaaatgttaagtagaggtattgctgtccat cacggtggattattgccaataatgaaggaagtgattgaaattttatttgcaaaaacttta atcaaagtgctatttgccactgaaacttttgcaatggggttaaatcttccaactagaaca gtggttttctcagaactacggaagcatgacggaacggggttcagaaatttacttcccggc gagtttacgcaaatgtcaggaagagccggacgacgtggtctggatactactggaactgtc attgttatgtcttataatgaacccttggagtccaaaccattccagcaaattacccttggt gttcctacaaaacttgtgtctcaattcaggttgacatataacatgattttaaatcttcta agaattgaagctttgagggtggaagaaatgatcaaacgttcattcagtgaaaatactacc caaagcggcttgaaagagaatgagaaagaaattatagaactgcagaagaagatagcagag atcagccaagcgggatgtcaagaatgcgatccagccaaattaaaagaattttcgactgca atatgtgattacacgaaactgactggtgagttaattcgactttctttggaaattccactt caccgtaagaggttcagaagaggcatgctctttatttatacggatgctgatggttttccg gctcctgcctttttgtatgacatcaagatgtcagactctctgttcgtggctcttgtcttt gacatagaaagatgtgaggagaacaacactggacttccatatatccccgagtcaccatct tttatcaagaacacgattccgaaatggaaattcaaaggtaatttcagatttacaacaatt cccttcaacaaagttcagtacgtaacaaggtttgtcctgcaagttttgttgaaatcaatc attcgaatggagcctgaatcaatagagaaagctgaagagcaaatactccaactgcttcat ttttacaagaagtttgaagagtacaattggtctgcatctctcaccattcctcaaaatgat ctctataaaaagatacaagactatagaaagatcattgccaatgcgccagtcattcagtgc ccttcgttgagagaacactatattcaaatcaaagacttagatagcttgagatcgaggttg ataactttgaagtcccttgtttcagacgacaacatgaccttactaccagattacgaacaa agattaaaagtactaaacgaacttgaatttgtcgatgatcacttgaatgttgtactgaag ggaaggattgcctgtgaaattaactcaggatgggagctggctctgaccgaactactgctg gataatttcctggctgattttgacccagaagagattgtagctttacttagtgcgtttgtt tatgaaggtagaactcgggatgatgaagagccagcattaactccccgacttgaaaaggga aaagcaaaaattagagacatcgtgagccatcttttagagatatttcaagacaagcaagtc tccttgagtgctgaagaagagtcatttttggaagcaaaacgtttcaatctggttaacgtc gtctacgaatgggcaaaaggaacttctttcagtgacattatgaaactctcatctgaagct gagggcacaattgttagagttattaccagattagatgaagtttgcagagaggtgaaatct gctgcattaattattggtgattcagcattgcatgataaaatgtctgaggcccaagaaaag ataaaaagggacattgtattttgtgcttccctttatctctag

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