Komagataella phaffii: PAS_chr2-2_0050
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Entry
PAS_chr2-2_0050 CDS
T01092
Name
(RefSeq) Component of the RSC chromatin remodeling complex
KO
K11756
chromatin structure-remodeling complex subunit RSC1/2
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr2-2_0050
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr2-2_0050
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
PAS_chr2-2_0050
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
PAS_chr2-2_0050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
Bromodomain
Motif
Other DBs
NCBI-GeneID:
8198258
NCBI-ProteinID:
XP_002492164
UniProt:
C4R310
LinkDB
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Position
2:complement(join(2285850..2288472,2288559..2288638))
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AA seq
900 aa
AA seq
DB search
MSALERESMIQRVRPLVDNVYGITDSKGQKLGDTFKALLPRSFLDYFKVIKRPMSLQKVR
INLNKKKYANVNEVIYDMAQITWNAKFYNEKDSDIYKQADILEDYIKETMIPAIRRDSSL
PGFEQVIYPNLGPLPDGPNYSTPITQPPPPSIPTSHVKSEPSTRAHSAAVTPPIGQATIS
NPHDNLSQQAPQALQFPSEALMVTTITGHRIPESGALENDDSQYPIPQPQESYYPPQAAL
RSLQEKKALVEAWHKRGRPPIIDKPHEMRIKNIMRSLKKLKSSQDPRRSVYNLFDRLPSE
QQHSDYFSLISDPMCFNDIRQNIKQRKYNDVEAFLNDVYKIVENNRLYYASDRHMIMDVN
DLENGLKEIVDIELARPEKELTSGDMTKTPMDSVLVKGRRYRVGDWVLIANPNDPRKPIV
GQIFRIWHEKEKDADFVNVCWYYRAEQTVHKEDRLFYKNEVFKTGQYRDHRASEIVGPCY
VAYYTRYQRGDPDFDVEGPIFICEFRFNDGDKQFNKIRTWKACLPDEVRHVEDPIIPSPE
LRHFPKYYSPIRYLLPQDAKITNEKPEPTIYNLNAPPLIGAVYAGPPSLDDDLCQYASSP
KIQLTKKLIPKSANNAPNPPLSGSSSRVNLSGYSPSPNDMAPNYNNLQTTPKMVNLGTPQ
PNGLGTPSYPGYRPSYADAAYGDQNTRPIPNTYTPPVNNYSNMTQRLNMSQVSSRYAPSK
VVSTPYNELTFSTGPYSGISTSSAFTMPADVEADFNQFALQGFTRVDISNEIRRLKKQNA
AKISFDELKQKQDELPLIWKRGPPVYVPNRVINNEIFQIDDSLNKIVPCRPKGDDYFAKS
FERRTRSHPEMEAGEISNETEIKELIEINEAPGGGIRSVPRLGHSSKFLAWAVKKRKLDY
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcattggaaagagaaagcatgatacagagggtaagacctttggtagataatgtc
tacgggatcacagattccaaaggtcagaagcttggtgacactttcaaagctttgttacca
cggtcgttccttgattatttcaaagtgatcaaaagaccgatgtccctacagaaggtaaga
atcaatttgaacaagaagaaatatgccaatgtcaatgaagtgatttatgatatggcccag
atcacctggaatgccaagttctataacgagaaggattcagacatttataaacaagcggat
attttggaagattatataaaagagaccatgattcccgccattaggcgagattcgtcactt
ccagggtttgagcaagtgatttatcccaatcttggacccttgcctgatggacctaattat
tctactccgatcacccagccaccacccccttctattccgacctcccatgttaaatcagaa
ccttcaacaagagcccattcagctgctgtgacacccccaataggacaggctacgatttca
aatccccatgacaacctttcacagcaggcaccacaagctttacaatttccatctgaggca
ctgatggttactacgattactggtcatagaattcctgaaagtggcgcacttgagaatgat
gattcacagtatcctatcccgcaaccacaagagtcttactatcctccgcaagcagcgttg
agatcattacaggagaagaaggcactagtcgaggcatggcacaagagagggagacctcca
attattgataaaccgcacgaaatgcgaataaagaatattatgagaagtttgaagaagttg
aaatcatcgcaggaccctcgtcgctctgtctacaatctttttgatcgccttccttcagaa
caacaacattctgactatttctcactcatatcagatcctatgtgttttaatgatattaga
caaaacatcaaacaaagaaagtacaatgatgttgaggcatttttgaatgatgtttacaag
atcgtggagaacaatcgtttgtattacgctagcgaccgtcatatgatcatggatgtcaat
gacttggaaaatggtttgaaagaaattgtcgacattgaacttgctagaccagagaaggaa
ttaacttctggagatatgacaaagactcccatggactctgtccttgtcaaaggtagaaga
tacagggttggagattgggttttgatcgctaacccaaatgacccaaggaaacctatagtg
ggccaaatatttagaatatggcacgaaaaagaaaaagacgcagactttgtaaatgtttgc
tggtattatagagctgagcaaaccgttcacaaagaagaccgactattttataagaatgaa
gtgttcaaaactggtcaatacagagaccacagagcttcggaaattgtgggaccttgttat
gttgcgtactacacccgataccaacgtggtgatcccgatttcgacgtggagggaccgata
ttcatatgcgagtttcgttttaatgatggtgacaaacagtttaacaaaattaggacatgg
aaggcttgtctccctgatgaagtacgtcatgttgaggatccaattatcccttctcctgaa
ctgagacatttccccaagtattattctcctattagatatctgttgccacaagatgcaaag
attacgaatgagaagcctgaaccaacaatttataatctgaatgctccccctttaataggg
gctgtgtatgcaggtccaccaagtctggatgatgatctttgccaatacgcttcaagtcct
aaaattcaattaactaagaaattgatccctaagtcagccaataatgccccgaacccccca
ttgagtggtagtagtagcagggttaatttgagtggttatagtccatctcctaatgatatg
gcacctaactataataacttacaaaccacacctaagatggttaacttgggcactccccaa
ccaaacggattaggcacccctagctatccagggtataggccttcctacgctgatgcagca
tatggtgatcaaaacactagaccaatccctaatacttacactcctcctgtcaataactac
agcaatatgacgcagagattaaacatgtcccaagtaagttccagatatgccccatccaaa
gtagtcagtacaccttataatgagttgacgttctccacaggaccctattccggaatttct
actagttcagcattcacgatgcctgctgatgtggaagcagattttaaccagtttgccctt
caaggcttcacaagggttgatatttcaaatgagataagaaggctcaagaaacaaaatgct
gccaagatttcttttgacgagctgaagcagaagcaagatgaacttccactaatttggaaa
agaggtcctccagtgtatgtacccaacagggtgattaacaatgagatttttcagatagat
gattcgttgaacaagatcgtaccttgcagacccaaaggtgatgattattttgcaaagtcc
tttgaaagaagaaccaggagccatccagagatggaagcaggggagataagtaacgagact
gagattaaagagttaatcgagatcaacgaagcaccgggtggaggaatcaggagtgttccc
agactgggccactcttctaagtttcttgcttgggccgtcaagaaaaggaaattggattac
taa
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