Komagataella phaffii: PAS_chr2-2_0061
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Entry
PAS_chr2-2_0061 CDS
T01092
Name
(RefSeq) Essential abundant protein involved in regulation of transcription
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr2-2_0061
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
PAS_chr2-2_0061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
TPR_Trm732_C
Vac14_Fab1_bd
HEAT_EF3_N
DDE_Tnp_IS240
Motif
Other DBs
NCBI-GeneID:
8199166
NCBI-ProteinID:
XP_002492152
UniProt:
C4R2Z8
LinkDB
All DBs
Position
2:complement(2264024..2269837)
Genome browser
AA seq
1937 aa
AA seq
DB search
MSRLERLVLLLDTGSTPFIRNTAADQLTDLAKQHPEEILNLLSRVYPYLRSKRWETRVST
AKAFGGIVSHAPVWDPNADDNDESPEQIKKELPSDYDKISSLDESLITFDDWNLYEIITH
GRKLLASGDGVLDHEHPKNLANYKNDIKRQKKSINSNLGLPGFPQDDNEYGSHSPELDSD
IKKEDLEASVKIEVKNELNTDHEKLLSSASPGISETEAIKTEKKASARMKALARRKAKAN
AKNSAFSKNKPVDLSQSSVSRQLEKDGSIPELKQTGDTATPVDEKSDLMDVDITSQANGN
KIVVEHKVSAISPILQNASAASGYVWPFQGVYELMLLDLFDPIWEIRHGAAMGLRELLKK
HALGAGRVKGKTIEENNQRNNATLEDLSFRILSLFALDRFGDYVSDTVVTPVRENAAQTL
ATVLLHLHEDLVLKVFHTLADLITQDGIEPKCWEAKHGGMLGLRYFVSVKTDILFKYPDE
LLSKVVDMVLLGLNQSSDDDVQSVAASTLTPITKEFVKLKLGLVFNIVDVLWGCLTDIKD
DLSAAIGSVMDLLAKLCSHTEVLEKLKKDAQFKTLIPRLYPFLRHSITSVRKSVLRTLQA
FLTIDDPFVKDWIDAKTFRLIFQNILLEQNPEVLALSYQLYETLLQEATNSKYVTILDVF
KDNYLPLLALLSIPIGVSRSTYAMPRSLLVRPRGNMQYDLEFVRSIFDDPVGAGIDSINN
DTNGKKRKMSSSSKPDFRDDDTGMPSHYESRVDIDAPIINGDLSLVPTETFVDTKTYASK
AYGRTLTNISDENVLSDVFTLLLKCMQSPYSSTRLFGAIVLEEYSISLNASSISQEEKEK
FLNIARNIVSDHLSQLLQNPDSLPFFRELTGTLKGVRTSCLYLFATFTDVGKLPASKVPQ
LPIVVQGEVQAGPSAFSIDTSRKIIDSSYDKLLKSLSPMYRMSASNALEDAKKRIELAIH
DTNRAKNERTTRVLSAFAALSLQLNGLPKKLNPVIRSLMDSVKSEELETLQLRSATSITH
LVSILNQQNKKNAADKITKNLSAFLCVDTSEVPEFTPNATFKDTILSLKREESKLDALEV
AALEREAHFAAIKRRGALYTLNIFLDKYGVSLFEQLPTLKSIIFSPLEKLNDKAEYDDET
GQSLVDSLGILRALFVNLHPDLRYLVIEKVPLILLALKSQYSVFRYCAARLLALLSSCVP
TKLIPIVIKDILPMINDPGSLVKRQGSIEFIFHLSVTMGPSILPYVVFLIVPVLGRMSDA
NNDVRFLATTTFASIIKLVPLEAGIEDPPDMPKELLEGRDREREFIQQMMDPTKIKPFEL
PVSINATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVASDHYLRQEEFAK
SQNANFRKIPSLIVCPPSLTGHWEQEFKQYAAFMTILVYTGSPSNRSSLRGKLGDVDVII
TSYDVARNDLEHLVKHDFNYCVLDEGHIIKNSNTKLTKSVKKFRAEHRLILSGTPIQNNV
LELWSLFDFLMPGFLGTEKIFQEKFAKPIAVSRNSKTSSKEQEAGALALESLHKQVLPFM
LRRLKEDVLSDLPPKIIQDYYCQLSDLQRQLYRDFAKKQKGTVEAEVKDANEKKESKQHI
FQALQYMRKLCNHPALVVTPKHPQYADVQAYLRDSKMDIRDIRHAPKLVSLKTLLLECGI
GSSDENSEEGLGSSLRRQQQQLVTGSEGVISQHRALIFCQLKDMLDMVENDLLRKHMPSV
TYMRLDGSTDPHSRQSIVRKFNEDPSIDLLLLTTKVGGLGLNLTGADTVIFVEHDWNPMN
DLQAMDRAHRLGQKKVVNVYRLITQNTLEERIMGLQKFKMNIASSVVNQQNAGLASMDTG
QLLDLFNVEDENGGSTVPAAATVTAVSDETNRKKVEIPDEAGLGGKAGSAVGELAELWDA
SQYEEEYDLDSFIKTLK
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagattagaaagactagtactactactagatacaggatcaacgccctttataagg
aacacggccgctgatcagcttacggatctggcgaaacagcacccagaagaaatacttaat
cttttatcacgcgtatatccctacttacgatccaagcgatgggagactcgtgtttcaacg
gcaaaggcttttggaggcattgtcagccatgctcccgtctgggatcccaatgcagatgat
aatgatgaatccccagaacagataaaaaaggaattgccctctgactatgacaagatttcg
agtctcgatgaatccctaattacattcgatgactggaacttatatgaaataattacgcat
ggccgcaaactattggcctcaggagatggtgttttggatcatgaacatccaaaaaactta
gcgaactataaaaacgacattaagagacaaaagaaatccatcaatagtaatttaggactt
ccagggtttccccaggacgacaacgaatatggttcacacagcccagaactagattcagac
atcaaaaaggaggaccttgaagcatcagtaaagatcgaagttaagaatgaactcaacact
gaccatgaaaagctcctctcctctgcttctccaggaatttctgaaacagaggctatcaaa
acagagaaaaaggcaagcgcccgcatgaaagcattggcaagacggaaagcaaaggcaaat
gccaagaatagtgctttttccaagaataagcctgttgacctatctcaaagttcagtgagc
aggcaactcgaaaaagatgggtcaattcccgagctcaagcaaacaggtgacaccgctacc
ccagtagatgagaaaagtgaccttatggatgtggatatcacctctcaagccaatggtaac
aagatagtcgttgaacacaaagtgtctgctatatccccaatcctccagaatgccagtgct
gcatcaggttatgtttggcccttccaaggagtttatgagcttatgcttttggatttattt
gatcctatctgggaaatccgacatggtgctgcaatgggtctgcgtgaacttctaaagaaa
catgctttaggagcagggagagttaagggtaaaacgatcgaagaaaacaatcagagaaat
aatgccactttagaggatttatctttccgtatattatcgctttttgctttagatcgtttt
ggagattatgtttccgacacagttgttacccctgtaagagaaaacgctgctcaaacactt
gcaaccgttcttttacatttgcatgaagacttggtattaaaagtttttcacacattagct
gatcttatcacacaggatggtatcgaacccaaatgttgggaagcgaaacatggcggtatg
ttggggcttcgatactttgtaagtgttaaaacagacattttgttcaagtatcccgatgaa
cttttgtccaaggtcgttgatatggtgcttcttggcttaaaccaaagttcagacgatgat
gtgcaaagcgtagctgcctctaccttgacacctatcacgaaggagtttgtgaagcttaaa
ctgggactggtgtttaatattgttgatgtgttgtggggatgcctaacagatataaaggac
gacctatctgctgcaattggctcagtaatggatttattagccaagctatgctctcatacc
gaagttttggaaaaacttaagaaggatgcacaattcaagactcttattccaaggttatac
ccgtttcttagacattccataacatctgtgagaaagtcagtacttcgaaccctgcaagcg
tttttgactatcgacgatcctttcgttaaggattggatagacgccaaaaccttccgactg
atatttcagaatatactgttggaacagaatcctgaagttttggctctgtcatatcaacta
tatgaaaccctgttacaagaagcaaccaattctaaatatgttactattttggatgttttc
aaagataattatcttccattactggctttattatcaattccaattggagtgtcccgttca
acttacgcaatgcctagatctttattagttaggccgcggggaaacatgcagtatgattta
gaatttgtgagatcaatatttgatgatcctgttggagctggaatagactcaatcaacaat
gacaccaatggtaaaaaaagaaagatgtcctcatcgtctaaaccggacttcagggatgat
gataccggtatgccctcacattatgagtcaagagtggatatagatgcacctattatcaat
ggtgatctttctttagttcctacggagacattcgtggacactaagacctatgcctccaaa
gcttacggccgtacactcactaacatttctgatgagaatgttttaagtgacgtgtttaca
ctactactcaaatgtatgcaatcgccttattcatctactagattgtttggtgccatcgtt
cttgaagaatatagtatttctttgaatgcttctagcatatcccaggaggagaaggagaaa
tttcttaatattgccagaaacatagttagtgatcatctttcacagctcctacagaatccg
gattcgttaccattctttagggagcttactggaacacttaagggcgtgcgaacatcatgt
ttgtatctatttgccacattcactgacgttggaaaactgccagcaagcaaagttccgcaa
cttccgattgtggttcagggtgaagttcaagcaggccccagtgcattcagcattgataca
agtcgaaaaatcattgattcctcttatgacaagttactaaaaagtttatctccaatgtat
agaatgtctgcctctaatgcacttgaagatgccaaaaagagaatagaactggctatacat
gatacgaatagggccaagaacgagagaaccacaagggtattatcagcgtttgctgcgctg
tcactacaattaaatggtctccctaagaaattgaaccctgtcattcgttctctgatggac
agcgtgaaatcagaggagctagaaactttgcagttgagatcggcaacttctattacacac
ttagtctcgatactcaaccaacaaaacaagaaaaatgccgccgacaaaattacaaaaaac
ctatcagctttcctttgtgttgacacatctgaagttcctgaatttactccaaatgctacg
ttcaaagatacaatcctttcattgaagagagaagaatcaaaactggatgctttagaggta
gcagcgttggaaagggaagcccattttgcagctataaaacgacgtggtgccctttacact
ttgaatatattcttggacaagtacggagtttccctttttgagcaactcccaactttaaag
tctataatattttcgccacttgagaagcttaatgacaaagcggagtatgatgacgaaact
ggccagtcattggtagacagtttgggcatccttcgtgccttgtttgttaatttgcatcca
gatttaaggtacctggtaattgagaaagtgccactaatcttgttagcactgaaatcacaa
tattcagtattccgatactgtgctgcaaggttgctagcattattgagttcatgtgtaccg
actaaactaattcccattgtcatcaaagatattttgccaatgataaatgaccccggatct
ctagtgaaacgccagggtagcattgagttcatcttccacctttctgttactatgggacct
agcatcttaccatatgtggtgtttttaattgttccggttctagggcgtatgagcgatgct
aacaacgatgttagatttctggcaaccacaacttttgcctcaatcatcaagctagttcca
ttggaggccggcattgaagacccaccagatatgcccaaagagttactggaaggaagagac
agagaaagagaattcattcaacaaatgatggatcctactaagattaaaccatttgaattg
ccagtttcaattaatgctaccttgaggaagtatcaacaagagggagttaactggttagct
ttcctaaataaatatcatttacatggcatattatgtgatgatatgggtctaggaaagact
ttacagaccatctgtatcgtagccagtgaccattatttgagacaagaggagtttgcaaag
tctcaaaatgctaactttagaaagatcccatctttgatcgtttgtccaccctcgttaacc
ggccattgggagcaggaattcaaacaatatgcagctttcatgacgatcttagtttatact
ggcagcccttcaaaccgttccagcttgaggggaaaattgggcgatgttgatgtgatcatt
acttcttatgatgttgcaaggaatgacttggagcatttggtgaagcatgatttcaactac
tgtgtcctagacgagggccacattatcaagaattcaaataccaagttgactaaatctgtc
aaaaaattcagagcagaacatcgtttgattctttctggaactccaattcaaaataatgtc
cttgagttatggtctctatttgacttcttgatgccaggctttttggggactgaaaagata
tttcaagaaaagtttgccaaaccaattgccgtatcccgaaactccaagacatcttccaag
gaacaggaggctggtgcactggctctagagtcattacataagcaagttttacctttcatg
ctaagacgtctgaaagaggatgttttatctgacttaccccctaagataattcaagattac
tactgtcaacttagtgatttgcaacgtcaattgtatagagattttgccaaaaaacaaaag
ggaactgtcgaggccgaggttaaggatgctaacgaaaagaaagagagcaaacagcatatt
ttccaagctttgcagtacatgagaaagttgtgcaatcatccagcattggtggtgactccg
aagcacccacaatacgcagatgttcaagcgtatttaagagattcaaaaatggatattaga
gacattagacatgctccaaagctagtttccttaaagactttgttgctagaatgcggaata
ggctcaagtgatgaaaatagcgaagaaggacttggatcttcactaagaagacaacagcaa
caattggtgactggatctgaaggtgtaattagtcaacatcgtgctctgatcttctgccag
ttgaaagatatgcttgatatggtggagaatgatttgcttcgcaaacacatgcctagtgta
acttatatgagattggatggttccaccgatcctcacagtagacaatctattgtcagaaaa
ttcaatgaagatccctccattgatttgctgttactgaccactaaagttggtggactgggt
ttgaacctcaccggagcagacaccgtgatatttgtggagcacgactggaatccaatgaat
gatcttcaggcaatggacagagctcaccggctgggccaaaagaaggtcgtcaatgtctac
agattgatcacccagaacacgctagaagagcgcatcatgggactacaaaaattcaaaatg
aatatagcatcctcagtagtcaaccaacagaatgctggtttggcatccatggatactggt
cagttattggatcttttcaatgttgaagatgagaatggagggtcaactgtaccagctgct
gcaactgttactgcagtttctgatgagaccaataggaaaaaagttgagatcccagatgaa
gctggccttggaggaaaggcgggatcagctgttggcgagttggctgaactatgggatgct
tctcagtatgaggaagagtacgacctggactcgtttatcaaaacgctgaagtag
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