Komagataella phaffii: PAS_chr2-2_0135
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Entry
PAS_chr2-2_0135 CDS
T01092
Name
(RefSeq) General transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr2-2_0135
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PAS_chr2-2_0135
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
C2c1_Nuc-II
Motif
Other DBs
NCBI-GeneID:
8198713
NCBI-ProteinID:
XP_002492070
UniProt:
C4R2R6
Structure
PDB
PDBj
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All DBs
Position
2:complement(2132742..2133599)
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AA seq
285 aa
AA seq
DB search
MDAKEIVTVMKDLEKAESDSQIIRLLTLLQTDVVPTEKVLRETKVGVTVNRLRSHANPEV
GTLVKKIIKTWKDGVSQEKKKKAVSSAGSPAKSTTSTTTNERFVSKGPRTPKNDGVKVEI
YENKTRNGSISAIYTALAMDSDEQPSKIFELVKDIEKQCFKAVNFTVDDTYRNKLRSLIM
NLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKKNLFDAQGATENNS
VTDRFECGKCKQRKVSYFQKQTRSADEPLTTFCKCENCGNRWKFS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaaagagatcgtcactgtgatgaaagaccttgaaaaggccgaaagtgattcc
cagataataaggcttttaacacttttgcagacggatgttgttcccacggagaaagttttg
agggagaccaaagttggtgtcacagtgaataggctcaggtctcacgcaaatcctgaggtt
ggaaccttagttaagaagattataaagacctggaaggatggcgtatctcaagaaaagaaa
aagaaagcagttagttcagcgggtagtcctgctaagagtacgaccagtacaacgacgaat
gagaggtttgtcagtaaaggaccaagaactccaaagaatgacggggtcaaagttgagatc
tacgagaacaagactcgtaacggatctattagcgccatatacacagcattggctatggat
tctgatgaacagcctagcaagatctttgagttagtcaaggatattgagaaacagtgtttc
aaagctgtcaattttaccgttgatgatacctatagaaacaaattacggtcattaataatg
aatttgaagaataagaacaatccaactcttcgaaggtctattctagatcacgaaataatc
ccatccaaactagtgaccatgtctgcccaagagttagctcccgattctctcaaaaaggaa
atggaggaaatatacaagaagaacttatttgacgctcaaggcgccacggagaataactct
gttacagatagatttgagtgtggtaagtgtaagcaaaggaaggtcagttacttccagaaa
cagacaaggtcggctgatgaaccgttgaccaccttttgtaaatgtgagaactgtggtaat
aggtggaagtttagttga
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