Komagataella phaffii: PAS_chr2-2_0250
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Entry
PAS_chr2-2_0250 CDS
T01092
Name
(RefSeq) Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_chr2-2_0250
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
PAS_chr2-2_0250
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Motif
Pfam:
tRNA_int_end_N2
GlgS
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
8198656
NCBI-ProteinID:
XP_002491944
UniProt:
C4R2E0
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Position
2:1924293..1925408
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AA seq
371 aa
AA seq
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MLESDCDASDDEIQDWNVVLSLADQKVPKRGEKDYEPLEGDYDSRNLLEAQGAMFQALEA
KKRGFACNIGQELRYTIRFNKRNQSFHILNAQGKFLDSMGKTDGNHKTWFTKFEALYLIE
RGTCRITYDEDNNYTLSLEECYTVILTDDEDIDKYNVYSHLKRNGYIVLEYASLSIEKET
RYVNIDKNIHSVYDKPLFKYTFTNYSTIFCNLQLDIYNRHKVSPAPTSPFEICFSVWKPQ
VNFQKKSPPLPDFQISVINIENYNFPTLDDISHLLGQANTILKPSRNPVSNLKFGKENII
IATVDHGLFNFIKLSRTNFHSHGLIWEDGWLKRKQRRAKNIQLPNSDWKSWVSTIRNSLR
MLTLRCGSVEP
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagtccgattgtgatgcgtctgatgacgaaatccaagattggaatgtggtgctc
tctttagctgatcagaaagtccccaaaagaggggagaaagattatgagccattggaggga
gattacgattcaagaaaccttcttgaagcccagggcgccatgtttcaggctttggaggct
aaaaaaaggggatttgcctgtaatattggccaggaattgcgatatacaatcagatttaat
aaaaggaaccagtcctttcatatcttaaacgcccagggcaagtttttggactctatgggt
aagacagatggaaaccataaaacttggtttacaaagttcgaagccttatatttgatagag
agaggaacttgcaggataacgtatgacgaggataacaattacactctaagtttagaggag
tgttacacagtaatcttgaccgatgatgaggacattgataaatacaacgtttacagccat
ttaaagaggaatggatacatcgttctggaatatgcatcgctaagcattgaaaaggagacc
agatatgttaacatagataaaaatattcacagcgtttatgataaacctcttttcaagtat
acctttacaaattattcaacaatcttttgcaatttacaactggacatttacaatcgtcac
aaagtatcaccagcaccgacttctccatttgagatatgtttcagcgtttggaaaccacag
gtcaactttcagaagaaatcacctccattaccagattttcaaatttcggtgatcaacatt
gaaaactataattttccaactttggatgacatttcacatcttttaggacaggcaaatacc
atactcaaaccgagtcgtaacccagttagtaacctcaagtttggtaaagagaatattatt
attgcgacagtagatcatggactgttcaattttatcaagttgagtaggaccaattttcat
tctcatggattgatatgggaagatggatggctgaagaggaaacaaaggagagcaaagaac
atacaacttccaaattctgattggaaatcctgggtaagcacaattaggaactcgctgagg
atgttaactcttcgctgtggctcagtggaaccataa
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