Komagataella phaffii: PAS_chr2-2_0295
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Entry
PAS_chr2-2_0295 CDS
T01092
Name
(RefSeq) TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
ppa
Komagataella phaffii
Pathway
ppa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PAS_chr2-2_0295
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppa01002
]
PAS_chr2-2_0295
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr2-2_0295
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr2-2_0295
Peptidases and inhibitors [BR:
ppa01002
]
Metallo peptidases
Family M1
PAS_chr2-2_0295
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PAS_chr2-2_0295
Coactivators
SAGA/TFTC/STAGA complex
PAS_chr2-2_0295
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
PAS_chr2-2_0295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Motif
Other DBs
NCBI-GeneID:
8198293
NCBI-ProteinID:
XP_002491893
UniProt:
C4R289
Structure
PDB
PDBj
LinkDB
All DBs
Position
2:1832433..1837148
Genome browser
AA seq
1571 aa
AA seq
DB search
MPAIPYDYPSIVSHGTPRKQKSQAKSSRATQNFKIAHQKVQLDVDLATQTVNGETELTIF
ATDPSLNKVRLDARCMQIQEVFVNSTKADFIMEDFSRNDEFQNDPNNETLQRIHRYQKSY
DTNSESIDIYQHHFYRSKFNPLYLDLNDHESPESVETLNTENLTVYLPENLRLRPHDLSN
TYSPVSNYNSPLTTNSALMNSDRLYTPFVLKIKYSLRVPKNGIIFNGGVHTTIEKTQWFC
HTINNDIGCSASSWMPCIDNFYEKYTWELQLIVPKTVGDIGQTKPIGEKFSKQPNDNDDD
DDDMIDSYQETDEEMTREIKVVLPDFESVKESPHILDHSKKVVSVQLYNNPVAAHHIGFF
IGPFEQLPASTFKFLDQSQPRILDGEENNHSDFTSNVAARVYFLPSQKEMVLNTCLALYK
NLDFYSKEFGSYPFSTYSMVFVDNLPTQYSSFAGVSVISSEVLYESSLVEPLFPVTELLS
LIVAEQWSGINIVPKSLNDYWCVIGIAHFMAGQFLKKLFGFNNYKFVIKQRSDRICREDI
GKAPLANQHFRFPVNDATDFKFIRLKAPLVLFILDRRMTKTDRSFGLSRVIPKIFLQAMS
HDLYNGNCLSTSHFQHVCEKVAHHKLDPFFNNWVHNSGTPVLRVTQRFNKKRMFIEMGIR
QVQGYELARSDASKSRKKDPVSFLNEACQHVNQTGPGITSQIFTGPMTIRIHEADGTPYE
HIVDLKEGFTKLDIQYNTKYKRIKKNKKDEELTKKDDSENTVNRLGDILSRSKDMQEWHL
EDLSAEGEEARTQDAFEWIRIDADFEWICQIHLNQPDYMYQSQLQQDRDVEAQLDSVNFF
SNSLRPNVFYSSVLVRTLMDSRYFYGVRCEAAKGLARLSKEENNHIGLHHLLKALKQLFC
YPMHDSHEDATTLINNPKNFLPLPNDFSDFQRMFIQETIPAALSTIKIKDSDLFLNLRRI
LLRLLQYNDNLSNDFNDCFYICSLIRALSNTVVEAGMVLQDHNEGISYYDEATSEDGTLD
DRMNNINRETIIEFNRRLQLDQWDVSYHTCISDTILNEKVRLGSEGLIKFRFPELLQVTQ
KKYSIYVRLAGFRGLLLLGGLKNKSVLHYFFSTAKLESSALFKRGLIDHFLEAVGVAALF
GTPSTLDDPEFDRFEEELEQLRLSKIKDGKPSSGLENSKELLNASNFVVEEGFSNKSRRD
TYIRTTMKGAIQILKRDYAIGEGLTKELWSAVHSCLLSINLKRDIFDLIDLMYDAYDSYL
VKIDSVSDKKVVTRVETVGDNTAIVKLYAKPRPKPSIVDSTSQKIEEKPKIKLGFKKSTE
KSSGLSLKIKPKNVEVPEKVRPSKVKKEIEPPKENGPSEKKIPPPSSLVDDVTAPTPKVE
DISNHRSKKQLLVKFGYKTANSRRFVRILLREKRLEFSSIPFNPKRYDVKLKYNRELLEE
RTRARVDEDQNSSSNSYSMSIDGKATNSGPVDSLNDDSIPTDGVAELKPEVEQRKKRVAK
STPKARQSRTIESDQDALISRSHKRQKFNPTINKPKSEEEIGENQTPEAGTQPTPKTKPK
AKTKIKLKLKF
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctattccatacgactatccttcgatagtctcacatggtactcctagaaagcag
aaaagtcaggcaaagagctcacgagcgacgcaaaacttcaaaattgctcatcaaaaagtt
cagcttgatgttgacctcgccactcagacagtcaatggagagacggaactgaccatattt
gctactgatccttcgttaaacaaggttcgtctagacgcaagatgtatgcaaatacaggag
gtatttgtgaactcaacgaaggccgactttatcatggaggatttttcccgaaacgatgaa
tttcaaaatgatccaaacaacgaaacattgcaacgaattcatcgttatcaaaaaagttac
gacaccaattctgaaagtattgacatctaccagcatcatttctatcgtagcaaatttaac
ccgttgtatttagatttgaacgatcacgaaagtcctgaatctgtggaaactctaaacact
gaaaacctgaccgtgtatttacctgaaaacttgcgattacgtccgcatgatttaagcaat
acctactcaccggtttcaaattacaattcgccattgacgacgaactctgctttaatgaat
tctgatcgactgtatacccctttcgttttaaagataaaatattcattgagagtacctaag
aacggaataatattcaatggaggcgttcacactacaatagagaaaacgcaatggttttgt
cacactataaataatgacatcggttgtagtgcaagctcttggatgccttgcattgataac
ttttacgaaaaatacacttgggaacttcaattgattgtccccaagacagtcggtgatata
ggtcaaactaagcctattggtgaaaagttttcaaagcaacctaatgataatgatgatgac
gatgatgacatgattgactcctaccaagaaacggatgaagaaatgacaagagaaataaag
gtggtacttccagactttgaaagtgttaaggaaagtccacatatacttgaccactctaag
aaagttgtcagcgtccagctttataacaatccagtagctgcacatcacataggatttttt
attgggccttttgaacagctcccagcttccacatttaagtttctagatcaatctcagcca
aggatattggacggagaagaaaacaatcatagtgattttacgagcaatgttgcggccaga
gtctactttttaccctcacagaaagaaatggtgttaaacacttgcctggcgctttataaa
aatttagacttttattccaaagagtttggatcttatcccttcagcacctactccatggta
tttgtggataatcttccaacgcaatatagcagctttgccggagtttcagttataagctct
gaagtcttatatgagtctagccttgtggaacctttattcccagtcactgagctactgtct
ttaatagttgcagaacaatggtccggaattaacattgttcccaagagcttaaatgattac
tggtgtgttattggtatagctcattttatggcgggccaatttttgaagaaactgttcggc
tttaacaattataaatttgttataaagcaaagatccgatcgcatttgtcgagaagatata
gggaaagctcctttagcaaatcaacattttcgatttcctgtcaatgatgctacagacttc
aaattcataaggctaaaggctccattagtcttgttcattttagatagaaggatgactaaa
acggacagatcttttggtctctcacgagtaattccaaaaatatttcttcaagctatgtct
catgacctatataatggaaactgtctgtcaacaagtcactttcaacatgtctgtgagaag
gttgcgcaccacaagttagatcctttcttcaacaactgggtccataattctggaacccca
gtacttagagtgacccagagattcaataaaaaacggatgtttattgagatgggtatcagg
caggtccaaggctatgaattagctaggtcagacgcttctaagtctcgtaaaaaggatccg
gtatcatttttgaacgaggcgtgtcagcacgtcaaccaaactggtcctgggatcacctca
cagattttcacaggtccaatgacaatacggattcatgaagcagatggaaccccttacgaa
catatagtagatctaaaggaaggttttactaaactggacattcaatacaacaccaaatat
aagagaatcaaaaagaacaagaaagatgaagaattaacgaagaaggatgattccgaaaat
acggtgaatagactgggtgacatactttcacgctcaaaagacatgcaagaatggcattta
gaagatcttagtgctgaaggtgaagaagcaagaacacaagacgcatttgagtggattaga
attgatgcagattttgaatggatttgtcagatacatctcaaccaacctgattatatgtat
cagtcccagttacaacaggatagagatgttgaggctcagcttgatagtgtcaattttttt
tcaaactctcttagaccaaatgtattttattccagtgttttggtgagaaccctgatggat
agtagatatttttatggagttagatgtgaagctgcaaaaggattggcccgactttccaaa
gaagaaaacaaccatattggactacaccatttattaaaagcattgaagcaattgttctgt
tatccaatgcatgactctcatgaagacgcaactacgttaataaataatccgaagaacttt
ttaccccttcccaatgatttttctgattttcaacggatgttcattcaggagacaatacct
gcggctctttccacaataaaaattaaagattcggacctatttttgaatttgagaaggatc
ctgctcagattattacagtacaacgataatttaagcaatgattttaatgattgtttctac
atctgcagcttgattcgggccttgtcaaacactgtagttgaagcgggaatggttctacaa
gaccataatgaaggtatatcttattatgacgaagctacctctgaagatggcacattggat
gatcgcatgaataatatcaaccgagaaacgatcatcgagtttaacagaaggttacagctt
gaccaatgggatgtttcttatcacacttgtatcagtgatacaattctgaacgaaaaggtt
cgtttggggagtgaaggactcataaaatttcgctttccggaactattgcaagttactcaa
aagaaatattcgatatacgttagattggccggattcagagggcttctattgttaggcgga
ttaaagaacaagtctgtgctacattatttttttagtaccgcaaaacttgagtcatcagca
ttgtttaagagggggttaatagaccattttctagaagcagtgggtgtagccgctttattt
ggcacaccttccactttagatgatccagagtttgatagattcgaggaagaactggaacaa
ttgcgacttagcaagatcaaggacggaaagccatcttctgggctagaaaattctaaggaa
ttattgaatgcaagcaatttcgttgttgaagaaggattttcaaataaatctcgaagagac
acctatatcaggactaccatgaagggggccattcaaattttaaaaagggactatgcaatt
ggtgagggtctcacgaaggaactatggagtgcagtgcattcttgtttactgagtattaac
ttgaaaagagacatatttgatctgattgatctcatgtatgatgcttacgactcctacctt
gtgaagatagattctgtttcggacaagaaagtggttactagagttgaaacggtaggtgac
aacacggcgatagtaaaactttatgcaaaaccacgcccgaagccttcaatcgtggactct
actagccaaaaaatcgaagagaaacctaaaataaagttagggttcaaaaagtccacagag
aaaagctcgggtctctctttgaaaattaaaccaaaaaatgttgaggtgccggaaaaggtt
aggccatccaaagtcaaaaaggaaattgaaccaccaaaagaaaatggaccttctgagaaa
aaaataccgcctcctagctcacttgttgatgatgtcactgctccaacacccaaagttgaa
gacatctctaatcacagatccaagaagcagcttctagttaagtttggttacaaaactgct
aactccagacgatttgtcagaatcttgctccgggagaaaaggctggaattttcttccatt
cctttcaacccaaagcgatatgatgtaaaattgaagtacaatagagagctacttgaagaa
aggactagggcaagagttgatgaggatcaaaattcttcctcgaactcctattcaatgtca
attgatggtaaagcaacaaattcaggccccgtcgatagcctcaacgacgattccatacct
acagatggagtcgcagaactcaaaccagaagttgaacagagaaagaaaagagttgcaaag
tccaccccaaaagctcgtcaatctagaaccattgaatccgaccaggatgcattgatttct
cgatcccataaaagacaaaaattcaatcccactatcaataaacccaagtccgaagaagaa
ataggggaaaaccaaacacctgaagctggtacacaaccaactcccaaaacgaagccaaag
gccaaaactaaaattaaactaaaactcaaattttaa
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