Komagataella phaffii: PAS_chr2-2_0325
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Entry
PAS_chr2-2_0325 CDS
T01092
Name
(RefSeq) Nucleoporin involved in nucleocytoplasmic transport
KO
K18722
nucleoporin NUP2
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr2-2_0325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr2-2_0325
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PAS_chr2-2_0325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
NUP50
WH1
Motif
Other DBs
NCBI-GeneID:
8198225
NCBI-ProteinID:
XP_002491861
UniProt:
C4R257
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All DBs
Position
2:1766786..1768597
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AA seq
603 aa
AA seq
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MSGKRRAGSQIQRETLGHDDDTSDEQSSGLHRASAEVLSKRKILKPRGMLSSKQSTGIKF
SHPPVPTVSSTNSAPSLADDNTHKIVALNNQFVAAIEQARSSDPSADFTPILTKYLDYLK
SLKNSQLLPKSQSEAQKTSKAEPIDVDSDSGSASEDSKPTEVKIQGPSFSLETVPTAKNS
VFSFGKKSKPEIVFSDDSEEEVKVEGPSFTLSQPVDKSKFTGVFKFSAEASKAKEDAAIE
PPSKTDEEKQPSAFESQPDVSAKGELTASKPRTLASSTNTTTDSGQKPVASGSTTTDKGT
TKPFTFGTTASVPGSSKPFTFGSADTENGAKKFTFGTSGSTETSAAEEKPKPFTFGSSSV
TDKAESDSLKPKGFTFGSNNENASKPFTFGETKTDSSSSKTFTFGSSKPLEPSKQSAFTF
GGSASTKAAPTSSFGFTFSTPSTNSATTTATTNTQPEAKNADEQVEEVEVKGDFKKVDLK
PIEAKESKTNETTLYEKRAKLMLYDPSNTESVYTNKGVGELSIRKNNDTGKARIVVVIDN
TFRKLLNTAILAQFKYEKLGKGDLVKVPTINSDGKLETYVIKVKTAADGEKLLTELNKAK
ENV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaagaggagagctggttcccaaattcaaagggaaactctcgggcacgacgat
gacacatcggacgaacagtcatcgggattgcatagggcttcagcggaagtcttatccaaa
aggaaaatcttaaaacccagaggtatgttgtcttctaaacagtccacaggaataaagttt
tcgcatccacctgtacctacagtgagcagcaccaattccgcaccttctttggctgatgat
aacacgcacaagattgtagcgttaaacaatcagtttgttgccgctatcgagcaagccagg
tctagcgatccaagtgctgatttcacgcccattctcacaaagtatctggattacttgaaa
tcattgaaaaactctcaattgctaccaaaatctcagtcagaggcacagaaaaccagtaaa
gcagagccaattgacgtggactctgactccggctctgcgtctgaagatagtaaacctact
gaggtcaaaattcaaggaccatccttcagtctggaaactgttccgacggctaaaaattcc
gttttctcgtttggaaaaaagagtaagcctgaaattgtctttagtgatgattcagaagaa
gaagttaaggtagaaggcccatcgtttactctatctcagcctgtagataaatccaaattt
actggcgttttcaagttttcagctgaggcatcaaaggccaaggaagacgctgcaattgag
ccaccatccaaaactgatgaagagaaacagccttccgcttttgaatcgcaaccagatgtt
agtgccaagggtgagttgactgcctcaaagccgcgtacattagcttcatccactaatact
accactgactccggacaaaagcctgtagcatctgggtcaacaactacagataaaggaacg
accaaacccttcacatttggtaccactgcttctgttcctggctcctctaagcctttcacg
ttcggttctgcagatactgaaaatggtgccaagaagtttacctttggtacatcgggctcg
actgagacaagtgctgctgaagagaaacccaagccttttacatttggatcttcttctgtc
accgacaaagcagaatctgatagcttgaagcctaaaggttttacttttggttcaaacaat
gagaatgcttccaagcctttcacatttggtgaaactaaaactgattcttcatcttccaaa
acttttacttttggatcttcgaaacctctagaaccttcaaaacagtctgcttttactttt
ggaggttcagcatccactaaggcagcaccaacttcatcctttggattcacgttttcaact
ccaagcacgaattctgcaactacaactgctactaccaatactcagcctgaggccaaaaat
gcagatgagcaggttgaggaagtagaggtcaagggcgactttaaaaaagtagatctgaaa
cccattgaagctaaagaatcaaaaactaatgaaacgacattatacgagaaaagagccaaa
ttaatgctatatgatcctagtaacactgaatctgtttacacaaataaaggcgtcggagaa
ctaagtattaggaaaaacaacgatactggaaaggcaagaattgttgtggtcattgacaat
actttcaggaagcttctcaatactgctatcttggcgcagttcaaatacgagaagttggga
aaaggtgacctagtcaaggtgcctacaatcaattccgatggaaaattggaaacctacgtt
attaaggtaaagacagctgcagacggtgagaaactactgacagaattaaataaagccaaa
gagaatgtataa
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