Komagataella phaffii: PAS_chr2-2_0379
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Entry
PAS_chr2-2_0379 CDS
T01092
Name
(RefSeq) Probable RNA m(5)C methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr2-2_0379
Enzymes [BR:
ppa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
PAS_chr2-2_0379
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PAS_chr2-2_0379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
FtsJ
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
8199090
NCBI-ProteinID:
XP_002491806
UniProt:
C4R202
LinkDB
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Position
2:complement(1678831..1680657)
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AA seq
608 aa
AA seq
DB search
MGRKAKDKQSAPPSYEEFHGIQKERNSKRSRRAKAIENSASKKPKKETSPSPKKKSTKVT
RDNLDIEEDDQDLPHVDLEELNAAKKSLFEDSAEEDDDDFQDALDADEFVDSDEDEREKP
MFSDDEDDDLEELNATNMEALSRKLDEEQELEALEAEEELVQTNVPEPRAIVLPTPEEKE
LEASQPPDLTVVRTRMIEIVKVLEKFKILAQEGKSRSQYVDQLLEDICTYFGYTPFLAEK
LFNLFSPSEAIEFFEANEIARPVTVRTNTLKARRRDLAQKLVNKGVNLQPIGKWTKVGLQ
IFDSQVPIGATPEYLAGHYILQAASSFLPVMALDPQENERILDMAAAPGGKTTFISAMMK
NTGCVFANDSNKARTKSLIANIHRLGCRNTVVSNYDAREFPKVIGGFDRVLLDAPCSGTG
VIAKDSNVKVARTEKDFIQIPYLQRQLLLSAIDSVNANSRSGGIIVYSTCSVAVEENEAV
VNYALKKRPNVRLVDTGLTIGKPGFTSYRGMKYHPSVNLTRRYYPHTYNVDGFFVAKFKK
IHSSIHDESKAGAKEKEAAARSEGAEKGIIKDDFAHFDSDEDKELIETSFKRNLKRRGIN
PNAKNIQL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaagctaaggacaaacaatcagcgcctccttcttatgaggaatttcacggc
attcagaaggagagaaactccaaacgttctagacgggctaaagctatagaaaactcagct
tcaaagaaaccgaagaaggaaacttccccaagtcctaaaaagaaatctacgaaggtcacc
agagataatttagacattgaggaagatgatcaagatcttccacatgttgacttagaggag
ttgaatgctgcaaagaaatccttatttgaggattctgctgaagaagatgatgatgacttc
caagatgcgcttgatgcagatgagtttgtggactctgatgaagatgaaagagagaagcca
atgttttccgatgacgaagatgatgacttggaggaattgaatgctactaacatggaggct
ttgtctcgtaaattggatgaagagcaagaattggaagctttggaggcagaagaagagctt
gttcaaactaatgttccagaaccccgagccatcgttcttccaacacctgaggaaaaggaa
ttagaagcgagtcaaccaccggatttgaccgttgtgaggactagaatgatagaaattgtg
aaggttttagagaagtttaagatactagctcaagagggaaagagtagatcgcagtatgtg
gatcaacttctcgaagacatatgcacctattttgggtacacaccattcttggctgaaaaa
ttatttaatttattctctccatcggaagcaattgagttttttgaggccaacgagattgcc
agacccgtcacagttagaactaacactcttaaggctcgtcgtagagatcttgctcaaaag
ctggttaataagggtgtcaacttacaacccattggaaagtggaccaaagttggcctgcaa
atttttgactctcaagttccaattggtgccacccctgaatatcttgccggacattacatt
ttacaagcagcttcatcgtttcttcccgtcatggccttggatccccaagagaacgaacgt
atcttagatatggcagctgctcctggaggaaagacaacatttatttctgccatgatgaaa
aacactggttgcgtattcgccaacgactcaaacaaagcaagaacgaagtctttaattgcc
aatattcatcgtcttgggtgtaggaatactgtcgtgtccaattatgatgctagggaattt
cctaaagttattggcggctttgatagggttcttttagatgctccatgctctggcactggt
gtcatcgccaaagactccaatgtcaaagttgctagaaccgaaaaggactttatacagatt
ccttatttgcaaaggcaacttttactatcagcaattgattcggtcaatgctaactctcgt
tctggaggtatcattgtgtattctacctgctctgttgctgtagaagaaaacgaagcagtt
gttaactatgctctgaaaaagagaccaaatgtgaggttagttgacacaggactcacgata
ggtaaacctggttttacgtcctacagaggcatgaaatatcatccctctgtaaatcttacg
agaagatattatcctcatacttataatgtggatggatttttcgtagccaaattcaaaaaa
attcattcctccattcatgatgagtctaaggcaggtgccaaggagaaggaagcagctgcg
cgttcagaaggtgctgagaaaggcattatcaaagacgactttgctcactttgactcggat
gaagataaggagctaatagaaacttccttcaagagaaatctgaagaggagaggaatcaat
cctaatgcaaagaatatacaactatga
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