KEGG   Komagataella phaffii: PAS_chr2-2_0387
Entry
PAS_chr2-2_0387   CDS       T01092                                 
Name
(RefSeq) RNA polymerase I subunit
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
ppa  Komagataella phaffii
Pathway
ppa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PAS_chr2-2_0387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppa03021]
    PAS_chr2-2_0387
Enzymes [BR:ppa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PAS_chr2-2_0387
Transcription machinery [BR:ppa03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     PAS_chr2-2_0387
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 8199097
NCBI-ProteinID: XP_002491799
UniProt: C4R1Z5
LinkDB
Position
2:complement(1660528..1665450)
AA seq 1640 aa
MDIARPVGSEINSVDFEILTTEEIRKLSAKQVVNPQVFDNLGHPIAGGLYDLALGAFLRN
LCGTCGLDERFCPGHQGHIELPVPCYNPLFFNQLCLFLRSACVYCNRFKLKQSEVNFFAC
KLRLLQYGLMLECEELDGVSTGTKLEDIDVDDIDDGNDQGNGDDASLKRLRNEFVETAIA
TALSEGRTTEQGMTTSTIANERKAIIRSFNSRLLSRPKCDNCGMYSPSFRKDGSIKLFEN
ALTPKQISHNRVKGLTRETKFKQNEESAHSDDATPADNFPPIKTKSSFKYILSTEVRTIV
RKLFITEKDVLKYVFNARPNSNNIISADMFFIQALIVPPTRFRLPSKLGDEIHENSQNEQ
LSKILTTALTIRDLNESIITVQKDQITAEERKIIFNRLMNAFVTIQDDVNSFIDSTKSQN
AQANPGIKQALEKKEGLFRKHMMGKRVNYAARSVISPDPMLETNEIGVPPVFAKKLTYPE
PVTAYNAASLRQAIINGPDVWPGAIQIQNEDGRHVSLIGMTLEQRKAIANQLLTPSNGAT
VVNKKVYRHIKNNDIVIMNRQPTLHKASMMGHKVRVLPGEKTLRLHYANTGAYNADFDGD
EMNMHLPQNENARAEAYNLANTDSQYLTPTSGSPVRGLIQDHISAGVWLTNKDSFFTREK
YQQLIYGCLRPEDGHTVKSRIQTLPPTVLKPVPLWTGKQIITTILLNIKPIKMPGLNLKS
KNKIKASYWGGDSIEDRVIIRNGELLVGILDKSQYGASNFGLIHSLHEVYGPSVSSKALS
VLGRLFTNYIMMIGFTCGMDDLRLTAEGNKQRSEILQESVDLGRVAAAEVTNLPKDTKPG
DKEFMRRLEEILRDDGKLGILDAVTQSKVNVVTSKVVSSCIPEGTMKRFPENSMQAMALS
GAKGSNVNVSQIMCLLGQQALEGRRVPVMVSGKTLPSFKPFDTDARAGGYIKGRFYSGIR
PQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLTKQLEGAHIGYDNSVRDGDGSLIQFLYG
GDSVDVVKESHMYKFQFCAENYDSLLERYNPGQLVHNLDAESALKYAKKCRKNLKKQSNK
MHYQFEDKYMPVINKFNPAKYLGAVSEHFQDALDNFIDNNPQLFDKKSKRSLTEKKFRAL
MQLKYMRSLINPGEAVGIIASQSVGEPSTQMTLNTFHFAGHGAANVTLGIPRMREIIMTA
SLNIKTPQMMLPILDDVLDEQAQAFCRSVARVVLSEFIDYVTVTETSGSDAGVGSKQYNI
RLNFFSAEDYEQEYDVTRAELAEVLVRSFLSKLEVAIRKQLKKSRDQAVVPDEEIGEAVP
KSDRAFETSEAVKKSINDGDGDELDNNENEQGKEPVSYDEPDEQELEAMNRAAKSSDEEE
EDFMSSEEEKSSCDDESDDEEINAHRPPAENILDKMALERQTAVISAHSMISAFNFDDKN
GTWCEFQIKMVGQNYKLLMVNIIEELCQNVVVREIPNIGRCVLPQPEAGQRRHFITEGVN
FQAMWEQDAFVDVDAIRSNDTYAVLRTYGVEAARNTIVNEINNVFGRYAIAVSSRHLDLI
ADMMTRQGTYLAFNRQGIENSTSSFMKMSYETTCQFLTKAVLDNDREELESPSARLVVGK
LSKVGTGIFDVMARMPLPTQ
NT seq 4923 nt   +upstreamnt  +downstreamnt
atggatattgcgagaccagtagggtccgaaattaactctgttgattttgagattcttaca
actgaggaaattagaaagctttctgcaaagcaagtcgttaatccacaagtatttgacaac
ctgggccatcccattgcaggaggtttgtacgacttagcactcggtgcctttttaagaaac
ttatgtgggacttgtggtctggatgagcgattctgtcctgggcatcaaggtcatattgaa
ttgccagttccttgctataatcctctttttttcaaccaactttgtctatttcttcgtagt
gcttgtgtctactgtaacagattcaagctgaaacaaagtgaagttaatttcttcgcctgc
aaattgaggttgttgcagtatgggctaatgctcgagtgtgaagagttggatggcgtcagt
accggaacaaagttggaagatattgacgtagacgatattgatgatggtaatgatcagggc
aacggggacgatgcctccttaaaaaggctcagaaacgaatttgttgaaactgcaattgct
acagccctcagtgaaggaagaactactgagcagggtatgaccacatcaacaattgcgaat
gaaagaaaggccatcatccgttcgtttaactcccgacttttatcccgacctaaatgtgat
aattgtgggatgtattcccccagttttagaaaggacgggtctataaaactatttgagaat
gcattaactccaaaacaaatctctcataacagagtgaaaggcttaacacgtgaaactaag
tttaaacaaaatgaagagagtgcgcattccgatgatgccactcctgctgataattttcct
ccaattaagacaaagtcttccttcaagtacatattgtcaacagaggttcgaacgattgta
cgaaagctatttattactgaaaaggatgtactcaagtatgtgttcaatgccagacccaac
tcaaataacataatctccgccgatatgtttttcattcaagcactaattgttcctcccact
agattcagacttccatccaagttaggagatgaaatacatgaaaacagtcagaacgagcag
ctttccaaaatattaacaacagcactgactattagagatcttaatgagagtataataaca
gtacagaaagaccagattactgcagaagagagaaagattatatttaatcgattgatgaat
gcatttgtcacaatacaggatgacgtcaatagttttattgattctaccaaatctcaaaat
gctcaagccaatcctggtattaaacaagcattagaaaagaaagaggggcttttcaggaaa
catatgatggggaaaagagtcaactatgcagctcgttcagtcatctcgccagacccaatg
ttggaaacgaacgagattggggttcctcctgtgttcgcaaagaagttgacatacccagaa
ccagtcacagcttacaatgctgcttctttgcgacaagccatcataaatggaccagatgtt
tggcctggtgctatccaaattcaaaacgaagatggcaggcatgtatctttaatagggatg
accttagagcaaagaaaagcgattgctaatcagctattgactccctcaaatggagctaca
gttgtcaataaaaaagtctatagacatatcaaaaacaatgacattgtcatcatgaatcgt
caacccacattgcataaggcttcaatgatgggtcacaaggtaagagtgttaccaggtgag
aaaacattgcgattgcattacgccaatactggcgcttacaatgccgattttgatggtgac
gaaatgaatatgcatttgccccagaatgaaaatgctagagcagaggcatataatttggct
aacactgactctcagtatttaacacccacctcaggttctcctgtcaggggtttgattcaa
gatcatatttctgcaggtgtttggctaaccaataaagacagttttttcactagagagaag
tatcaacagttgatttacgggtgcctccgtcctgaagatggtcacactgtgaaatccagg
attcagacactacccccaacagttttgaaacctgttcctttatggactggaaaacaaatc
attaccactattctactgaacatcaaacctatcaaaatgccaggacttaacttgaaatcc
aaaaataagataaaggcttcttattggggtggcgactctattgaagaccgggtcataatt
cgaaatggggaactattagtcggaatacttgataaatctcaatatggtgcttccaatttt
ggtcttatacactctttgcatgaggtatatggaccttctgtttccagtaaagccctgtct
gttttaggtcgtcttttcacaaactatatcatgatgattggtttcacatgtggtatggat
gatttacgtttaactgctgagggtaacaaacaaaggtcagaaattctgcaagaatctgtg
gacttgggtagagttgcagcagctgaagtcaccaaccttcctaaagataccaagcctggc
gacaaagaattcatgcgtcgtctagaagaaatattacgtgatgacggcaaattgggtata
ctggatgctgtaacgcaatcaaaagtcaatgttgttacttccaaagtcgtttcatcttgt
attcctgagggtacaatgaagagatttcccgagaattcaatgcaagcaatggctttgtct
ggagccaagggatccaacgtcaacgtttctcagatcatgtgtcttctcggccagcaagct
ttagaaggacgccgtgtacctgttatggtaagcggtaagacattaccatcattcaaacca
tttgatacagacgctcgtgctggtggatatatcaaaggccgattttactctggaattcgc
ccacaggaatattactttcattgtatggctggaagagagggcctgattgataccgctgtt
aagacctctagatctggctatttgcagcgttgtttgacgaagcaattagagggagcacac
ataggatacgataactctgttagagatggtgatggatctctcattcagttcttatacggt
ggtgactctgttgatgttgtcaaggagtcacatatgtataaatttcaattttgcgccgaa
aactatgattcattgctggaaaggtataatccaggccagttggtacacaaccttgatgct
gaatctgctttgaagtatgctaagaaatgtagaaagaacttgaaaaaacaatccaacaaa
atgcactaccagttcgaagacaaatatatgcctgttataaataagttcaatcctgccaaa
tatcttggagctgtatctgagcactttcaagatgcgctggataacttcattgacaataat
ccccaactgttcgataaaaaatccaagcgttctcttaccgaaaagaaattccgtgcattg
atgcaactaaaatacatgagatctctgattaacccaggtgaagctgttggaataattgcc
tctcagtcagtaggtgaaccatctactcaaatgaccttgaacacgttccatttcgctgga
catggtgctgcaaatgtgaccttaggtattccccgtatgagagagatcatcatgacagct
tctttgaacattaagaccccacaaatgatgctaccgattctggatgatgttttggatgag
caggcgcaagcattttgcaggtctgttgcacgagttgttctgtcggagttcatagactac
gttacagtgactgaaacttcggggtcagatgctggagttggttccaagcagtataacata
cgcctgaacttcttctctgcagaggattacgagcaagaatatgacgttacacgagctgag
ttggcggaggtactagttagaagcttcttaagcaagctagaagtcgctattcgaaagcaa
ctgaagaaaagtcgggatcaggcagtagtgcccgatgaagaaataggagaggcagttcca
aaatccgatagagcttttgaaacaagtgaagcagtgaagaagtcgatcaatgatggtgat
ggtgatgagttggacaataacgaaaatgaacaaggcaaggaaccagtttcttatgatgaa
ccagatgaacaggaacttgaggctatgaaccgagctgcaaagtcctcagatgaagaggaa
gaagacttcatgtcttcagaggaagagaaatcttcttgtgacgatgaatcggatgacgaa
gagattaatgctcatagaccacctgcggagaatatccttgacaagatggcacttgaacgt
cagactgcagtaatcagtgcccatagtatgatctcagctttcaattttgatgacaagaat
ggaacctggtgtgaatttcaaatcaagatggttggtcaaaattataaattgttgatggtg
aacattattgaggagctatgtcagaatgtggtcgtaagggaaatacctaatatcggtaga
tgtgttctacctcagcccgaagccgggcagagaagacattttattacagaaggtgttaac
ttccaagccatgtgggagcaagacgcttttgtggatgtggatgctatcagatcaaatgat
acctatgctgttttacgcacttatggtgtggaggctgcaaggaataccattgttaatgaa
atcaacaatgtgtttggtaggtatgcaattgcagtttccagtcgtcatttggatttgatt
gccgacatgatgactcgtcaagggacttatctagccttcaaccgacaaggtatcgaaaac
tcaacttcatcattcatgaagatgtcttatgagactacttgccaatttttaaccaaggca
gttttggacaacgatagggaagaactagagtcaccttctgcacgacttgtagtcgggaaa
ctgagtaaagttgggactggtatttttgatgtcatggctcgcatgcctctgccaactcaa
taa

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