Komagataella phaffii: PAS_chr2-2_0429
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Entry
PAS_chr2-2_0429 CDS
T01092
Name
(RefSeq) Core Sm protein Sm F
KO
K11098
small nuclear ribonucleoprotein F
Organism
ppa
Komagataella phaffii
Pathway
ppa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PAS_chr2-2_0429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr2-2_0429
03041 Spliceosome [BR:
ppa03041
]
PAS_chr2-2_0429
03032 DNA replication proteins [BR:
ppa03032
]
PAS_chr2-2_0429
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
PAS_chr2-2_0429
Spliceosome [BR:
ppa03041
]
Complex A
U1 snRNP components
Sm proteins
PAS_chr2-2_0429
U2 snRNP components
PAS_chr2-2_0429
Complex B
U1 snRNP components
PAS_chr2-2_0429
U4/U6.U5 tri-snRNP components
PAS_chr2-2_0429
Complex C
U2 snRNP components
PAS_chr2-2_0429
DNA replication proteins [BR:
ppa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
PAS_chr2-2_0429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
8199132
NCBI-ProteinID:
XP_002491760
UniProt:
C4R1V6
LinkDB
All DBs
Position
2:1581230..1581502
Genome browser
AA seq
90 aa
AA seq
DB search
MSFNPINPKPFLKSLINRSVIVKLKSSNVEYHGFLLSVDNYMNLSLDSSTKEFDPITEEL
TPLGSDLFIRCNNVLWISTTEEHVHTSKAQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttaatccaataaacccgaaaccatttttgaagtccctaattaacagatctgtc
attgtcaaactgaaatcatcaaatgtggaatatcatggctttctactcagtgtggacaac
tacatgaacctgtcactcgacagtagcactaaggagtttgatcctataacagaagagcta
acgccacttggaagtgacctattcatacgctgcaataatgtgctatggatctccacgact
gaagagcatgttcacaccagtaaagctcagtga
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integrated database retrieval system