KEGG   Komagataella phaffii: PAS_chr2-2_0429
Entry
PAS_chr2-2_0429   CDS       T01092                                 
Name
(RefSeq) Core Sm protein Sm F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
ppa  Komagataella phaffii
Pathway
ppa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PAS_chr2-2_0429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppa03019]
    PAS_chr2-2_0429
   03041 Spliceosome [BR:ppa03041]
    PAS_chr2-2_0429
   03032 DNA replication proteins [BR:ppa03032]
    PAS_chr2-2_0429
Messenger RNA biogenesis [BR:ppa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     PAS_chr2-2_0429
Spliceosome [BR:ppa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PAS_chr2-2_0429
  U2 snRNP components
    PAS_chr2-2_0429
 Complex B
  U1 snRNP components
    PAS_chr2-2_0429
  U4/U6.U5 tri-snRNP components
    PAS_chr2-2_0429
 Complex C
  U2 snRNP components
    PAS_chr2-2_0429
DNA replication proteins [BR:ppa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PAS_chr2-2_0429
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 8199132
NCBI-ProteinID: XP_002491760
UniProt: C4R1V6
LinkDB
Position
2:1581230..1581502
AA seq 90 aa
MSFNPINPKPFLKSLINRSVIVKLKSSNVEYHGFLLSVDNYMNLSLDSSTKEFDPITEEL
TPLGSDLFIRCNNVLWISTTEEHVHTSKAQ
NT seq 273 nt   +upstreamnt  +downstreamnt
atgtcgtttaatccaataaacccgaaaccatttttgaagtccctaattaacagatctgtc
attgtcaaactgaaatcatcaaatgtggaatatcatggctttctactcagtgtggacaac
tacatgaacctgtcactcgacagtagcactaaggagtttgatcctataacagaagagcta
acgccacttggaagtgacctattcatacgctgcaataatgtgctatggatctccacgact
gaagagcatgttcacaccagtaaagctcagtga

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