Komagataella phaffii: PAS_chr2-2_0443
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Entry
PAS_chr2-2_0443 CDS
T01092
Name
(RefSeq) Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad16p)
KO
K15082
DNA repair protein RAD7
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr2-2_0443
DNA repair and recombination proteins [BR:
ppa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
PAS_chr2-2_0443
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Motif
Pfam:
zf_Tbcl_Rhp7
LRR_At5g56370
KDM6_GATAL
Motif
Other DBs
NCBI-GeneID:
8198697
NCBI-ProteinID:
XP_002491746
UniProt:
C4R1U2
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Position
2:complement(1555860..1557530)
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AA seq
556 aa
AA seq
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MSRRRADKKENEPEVRGPNSALTAFLREQGIDAGAIRRRYEQSLLTERNEQTSHLHEQEE
PFQENEIILAAIEKRRRRRTDANSDSGYSDSSFSSDDVKDSHYCMNCDREFKITVYSKKL
EKDGKVGYLCTECTRFQVDQERRKKKTAFEARKKRKKLASALLNRQELKIPSLQDICIKL
LSKHIDDVHALGDISVVSLNKISRILSKNRSLNNRTMMLFLDVTLKHLEFWDCSNIDMAY
LDKITAFCPKLESMTLNMCGQLHNSNLISFAQNLLDLNSIVLNGPFLISEPTWVQFFELM
NARLKLFHVSNTHRFSGDSLQSLLTNCGTSLESLSLSRLDGLMSKAAYDVLPYHLRNLKH
LDLSNPFKENLIDDNLIMSILSVNGESIETLLLDGCSGLTDLFLVKGVKRYCSSLKRISL
ESLDQVTDSGLTQLFGGWTINSGLIEVNLKRCFGLGDRGILTFLNHSASSLVSLNLNSVY
SLSHTLFQTLSRTLKLPLLTALDLGFVRSVDDKAIAILSRICPKLKELEVYGNNRCTQRA
RIRRGLKVLGRQSDSI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaagaagggctgacaagaaggaaaatgaacctgaagtaagaggccctaatagt
gctctgactgcgtttttaagagaacaggggattgatgctggtgcgattagaagacgttat
gaacaaagtttgttgactgaacgtaacgagcaaacgagtcacttgcatgagcaagaagaa
ccctttcaagagaatgagatcatactggcagcaattgagaagagaagacgcaggaggaca
gatgccaattcagatagtggttattcagactcaagtttcagcagtgacgacgtgaaagat
tctcattattgtatgaattgcgatagggagtttaaaattactgtctattcaaaaaagtta
gagaaagatggaaaagttggttatttatgcactgaatgcacaaggtttcaagtagaccaa
gaacgaaggaagaagaaaaccgcattcgaagccaggaagaagagaaaaaagctagcttct
gctttgttaaacagacaggaacttaaaattcccagcttgcaagacatttgtattaaactt
ctaagcaagcacattgacgatgttcatgcactaggggacatcagtgtggttagcttgaac
aaaattagtcggatcctatctaagaaccgctcccttaacaataggaccatgatgttgttt
ctggacgtcactttgaaacacttggaattttgggactgttcaaacatagatatggcatac
ttggacaagatcaccgcattttgtccaaagttagaatcaatgacgttgaacatgtgtggg
caattacataatagcaacctgatctcttttgcccagaatcttttggatttaaactctatt
gtactgaatggtccgtttttgattagcgaaccaacttgggtgcaattctttgaactgatg
aatgcgagattaaagttatttcatgtatcgaacactcatagattctcaggtgattctctc
cagagtttactaactaactgtggaactagcctcgagtctctttctttaagtcgacttgat
ggtcttatgtccaaggctgcatacgatgttttgccctatcacttgaggaatttaaaacat
ttagatctttccaacccattcaaagaaaatctgattgacgataatttgattatgagtatt
ctctcggtgaatggtgaatctatagagacgcttctattggatggatgttctggtctaact
gatttgtttttagtcaaaggtgttaaaagatactgttcttctttaaaaaggatcagttta
gagtcgcttgaccaagttactgatagcggccttacacagttatttggtggttggaccata
aatagcggattgattgaagtcaatttgaaacggtgttttggcttgggagacagaggtata
ttgacatttttgaaccattctgcatcttctttggtgagtctgaacctcaattctgtgtac
agcttgagccatactttgtttcaaactttgtcgagaactctaaaacttcccctattgacc
gcactcgatttgggatttgttcgatcggtggacgacaaggcgattgcaattttgtcgaga
atttgtcctaagttgaaagagttggaagtttatggaaacaacaggtgtactcaaagagcg
aggataagacgtggcctcaaagtgttgggaagacaaagtgatagtatatag
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