Komagataella phaffii: PAS_chr3_0063
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Entry
PAS_chr3_0063 CDS
T01092
Name
(RefSeq) Putative protein of unknown function, contains a zinc finger region and has homology to human BRAP2
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppa04121
]
PAS_chr3_0063
Enzymes [BR:
ppa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PAS_chr3_0063
Ubiquitin system [BR:
ppa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
PAS_chr3_0063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_5
zf-C3HC4_3
DUF4200
RRM_1
zf-UBP_var
Laminin_II
zf-RING_4
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
8199349
NCBI-ProteinID:
XP_002492272
UniProt:
C4R3F7
LinkDB
All DBs
Position
3:complement(134238..135944)
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AA seq
568 aa
AA seq
DB search
MYNIVIDLDSPKELLLKARDQSEITSLRNLKALLAGNQIFGEDGLDLDYWSTTVLKHHNI
FVKSNTKQAQPHLALNFKKRSNIVEEIRNTLSKVQNTRIGVPDYRYTRIELIAFDKMHDT
NYEKTDYLRASFLGYGVIRLFREEINEKTTEDAELGPEPTSRSKIAAILAVPTYMSISAI
LKLVGENFVKDVVHFRIFKTQQYKRYMCILKFQSEDQCAAFQRALNGKPFNSIERERCQV
VQVNKIIINSPHDKANKSEELNFTYGIIELPTCPVCLERMDTNMTGLLTIPCQHTFHCQC
LAKWRDDTCPVCRYSQKERTSKDVTSEASQCSVCGDTANLWICLICGNVGCDRYNSAHAV
NHFKETSHCFAMQIETQRIWDYAGDQYVHRLIQNQTDGKLVELSLNNEKAGSSSDSNGKN
YSADKVDTMELEYSKLMIAQLEEYEKNMTKIMEEEKIRFANLQTAMGRLGTDSKVSERTK
ELETKLDQMMQKYDEEKTLALVLTEKLEFFDKQTSQLKKENEDLKEEINDLLMHFQTMEK
YKDADESVKEGKLVLKPSRKSSRKGSRK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatattgtcattgaccttgattcacccaaagagttacttttaaaggccagggat
caatcagaaattacaagcttacgcaatctgaaagctctactagctggtaatcagattttc
ggagaagacggcttggacttggactattggagcaccacagtactaaaacaccataatatt
tttgtcaagagtaatacaaagcaagcacagccccatcttgctctcaatttcaaaaagaga
tcaaacatagttgaggaaattaggaacactttaagtaaggtgcaaaatactcgcataggc
gttcccgattatagatatacccggatcgaattgatagcgttcgacaaaatgcatgacact
aactatgagaagacagactaccttagagcttcctttcttggctatggcgttataagattg
ttcagagaggaaataaacgaaaagactacagaagatgctgaacttggtcccgaacctacc
tctcgaagcaaaatagctgctattttagctgttccaacctacatgtcaatctcagccata
ctaaaactcgtcggagagaactttgttaaggatgttgttcatttccgaatattcaagacc
caacaatataaacgatacatgtgcatcctaaagtttcagagcgaggatcaatgtgccgct
ttccagcgagctctaaatggaaaaccctttaactcaatagaacgagaaagatgtcaggtg
gtccaagttaacaaaataattatcaattcccctcacgacaaggctaataaaagcgaggaa
ctcaattttacctatggtattatagaacttccaacttgcccagtttgtctagaacgaatg
gacactaacatgacaggattattgactattccatgccaacacacttttcattgtcaatgt
ttggccaaatggagagatgatacctgtcccgtttgtaggtactctcaaaaagagagaaca
tccaaagatgtaacaagtgaagccagccaatgttccgtttgtggagacacagcaaaccta
tggatatgtcttatatgcggtaacgtgggatgcgatcgatataactcagcacatgctgta
aaccatttcaaagaaacatcgcactgctttgcaatgcaaatagaaacacagagaatatgg
gactatgctggcgatcagtatgttcataggttgattcaaaatcagacagatggaaaatta
gtggagttgtctctcaataacgagaaagctggatcttcttctgattctaatggaaagaac
tattcagctgacaaggttgataccatggagctggaatactctaaactgatgattgcacaa
ctagaggagtatgaaaagaacatgaccaagataatggaggaagaaaagatacgatttgca
aatttgcagacagctatgggccgattgggcacagactccaaagtgagtgaaagaacaaag
gaattggaaacgaagcttgatcaaatgatgcaaaaatacgatgaagaaaaaaccttagcc
ttggtattgactgaaaaacttgaattttttgataagcaaaccagtcagctcaagaaggag
aacgaggatctcaaagaggaaatcaacgacctactaatgcattttcaaacgatggagaag
tacaaagatgcagatgaatctgtaaaggaagggaaattggtgctgaagccgtctagaaag
tccagcaggaagggctccagaaagtaa
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