Komagataella phaffii: PAS_chr3_0203
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Entry
PAS_chr3_0203 CDS
T01092
Name
(RefSeq) Guanine nucleotide exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr3_0203
Membrane trafficking [BR:
ppa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
PAS_chr3_0203
Protein recycling
Other Rab GTPase associated proteins
PAS_chr3_0203
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
CUE
CTLH
Na_Ca_ex_C
Motif
Other DBs
NCBI-GeneID:
8199952
NCBI-ProteinID:
XP_002492410
UniProt:
C4R3U5
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Position
3:complement(402910..404733)
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AA seq
607 aa
AA seq
DB search
MSFNKSFNKLGSAKATASVSTAKGDSVSANPTRSESESDRGHKQLINILGQFEPHHDNKQ
WTSIEASTVSDQDLFANDDDSDDDGDEDDEEEEGDVIENEKLPFKEGPSIAEKDEQRIDK
KPESSKLAAEVEPQVNVSNENEDSSEPDHSAIPSTAKEGIENITKGVDSIQVKSENKSKS
ERLTKQNSAKKTLTKFDFQRFLKQLRSKDCEPVLKYIKSFLTQFQARTWSVDEQIKLVKE
FQQFIFGKLIECKPFDNLSTDEDVNNTMEGLEKFIMSRIYNDTFPPLMVERKLSPSHRED
LSRDKIYHINLKKYRWIQPKHLDIHLKIDSETSFVKLAGTELSKVNDYKSPRDKIICILN
CCKVIFALIRQQQKIHKVEENADIFVPLLVFVILKCKTRNLISNLSFIERFRNDRFLVGE
SSYYVSSLQIAANFITTIEQSLLTISAEDFAAEIENNERKLKEESIKRKREQKILEEKKA
QEDAQKQGLFSPLTEMIAGTGKGEDFAPSQVLKSSAGIFQQSLSTLFSSPSRESSPVSSS
VDELKTAKKQSLEESKKEARIKSERETTLKNLKQMFPDMDSEILLDIAIAKNSNIGDCID
ACLELTE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaacaagtcattcaataagctaggatcggccaaggcgacagcctccgtctct
actgcgaaaggagattctgtatctgccaaccctacaagatcggaatccgaaagcgataga
ggacacaagcagctgatcaacatcttgggtcaatttgaacctcaccacgacaacaagcaa
tggaccagtatagaagcttcgactgtctcagaccaagatctctttgcaaatgatgatgac
agtgatgatgatggcgatgaagatgatgaagaggaggagggagatgtcatagaaaatgag
aaactaccttttaaagaaggaccctcaatcgcagaaaaggatgagcaaagaatagataag
aagcccgaatcatcaaagctagctgctgaagtagaaccacaggtcaatgtttctaatgag
aatgaagattcttccgagccagatcattctgctatcccttctacggctaaggagggcatt
gaaaacatcactaaaggagtagatagtattcaagtaaagtctgaaaacaaaagcaaaagt
gagagactaactaagcaaaattcagcaaaaaaaaccttgacaaaatttgactttcaaagg
tttctgaaacagttaagaagtaaagattgtgagcctgtcttgaagtatattaaatcgttc
ttaactcaatttcaagctagaacatggtctgtagatgagcagattaaattggtcaaagaa
tttcaacagttcatttttggaaaacttattgaatgcaaaccttttgacaacttatcaact
gatgaggatgtgaacaacactatggaaggtcttgagaaatttattatgagtagaatatac
aatgatacttttcctcctctgatggtggaaagaaagttatcaccatctcatagagaagat
ttatcgagggacaaaatctatcatattaatttaaagaagtacaggtggatccagccaaaa
catcttgacatccacttgaagattgattcagaaacctctttcgttaaacttgcaggaacc
gaactttccaaagttaatgactataaatccccaagagataaaattatatgcattttgaac
tgttgtaaagtgatctttgctttgattaggcaacaacagaaaatccacaaagtggaggag
aatgctgatatttttgtccctttgctagtttttgtcatactcaaatgtaagactagaaac
ctcatcagcaacctttcttttatcgaaagatttagaaacgataggtttcttgttggagaa
tctagctactacgtcagctccttacaaattgcagctaacttcataacaactattgagcaa
tctctgctgactatttctgcagaggattttgcggctgaaatcgaaaataatgagcgtaaa
cttaaggaagagtctatcaagagaaaacgagaacagaagatcttggaagaaaaaaaggca
caagaagatgctcagaaacaaggtttgttttcaccattgacggagatgattgctggaacg
ggaaaaggtgaggactttgctccttctcaagtactgaaaagttccgcgggtatctttcag
caatctctaagtactcttttctcttcaccctcacgtgaatcttcgcctgttagctcttct
gtggacgaattgaaaactgcaaagaagcaatcgttggaagaaagcaagaaagaggcaaga
ataaaaagtgagagagaaacaactttaaaaaaccttaagcaaatgttcccagacatggac
tctgagattttattagatattgccattgctaagaattcgaacattggagattgcatagat
gcctgcttggagttgactgaatga
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