Komagataella phaffii: PAS_chr3_0210
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Entry
PAS_chr3_0210 CDS
T01092
Name
(RefSeq) Subunit of the vacuole fusion and protein sorting HOPS complex and the CORVET tethering complex
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ppa
Komagataella phaffii
Pathway
ppa04138
Autophagy - yeast
ppa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PAS_chr3_0210
04148 Efferocytosis
PAS_chr3_0210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr3_0210
Membrane trafficking [BR:
ppa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
PAS_chr3_0210
Hops complex
PAS_chr3_0210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
TPR_IFT80_172
DUF5711
Motif
Other DBs
NCBI-GeneID:
8200193
NCBI-ProteinID:
XP_002492418
UniProt:
C4R3V3
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All DBs
Position
3:417461..419890
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AA seq
809 aa
AA seq
DB search
MNNPSLGWERLDTVFYRLRECYSPLQWDIELDEQPVAISNSAAAIAVFNSHSSHTSIDIF
SGSGVLLNSIPWLLSNGQIVSMSWTDNEELLVVLQNGTIRKFSDLTSEFDEFGLNLPEDS
IVQEAKFFQDGIVVLTNEKKFVFFSSFSQVPRHFTLNVDSIDCWNILYSDRVLQLFVSSN
KSIHISTLTTETSVKFGQVITGIEFPPNGSFASLLTPDNLIIATSDLENLLSEFSHNFKH
IRSMQWCSNDAVVLATNDELQVIGPGDDSISFYYENRPFIRSQNDGLTVLTQSKLEFLSR
VANFTEETFRIGSTKASAILLDSIDQLDRHSPKADENLRIVKPNLVEAVDNCIRSASEEF
DPQWQKKLLRAASFGKSILDFYSSEEFVEICNNLRVLNAVRQPEVGMFITYAQLLNYGHQ
GLIQSLIRRRLFLLASKICKFLSSFPDNIYFAWAKLKIKSSYNTNDKELSEIILDKLAET
KRVSYTGLSEVAYNEGRVELAHLLLDHEPVLENQVPLLLQMGQDKNALLKSEQSGNVDLI
CSVLLRLYYKFSLSQFFILLSDSTDVSIGIFKDIIGSVKPDLLLEYYYQDDQLIKIAESN
LLQDSTYSLDAETKRNRLLELLKAYEGKKFYENDVPIIESHLKLLNYQETLTNKFNHSFV
AFSKIETISELARLDDEKLTETQKYAYQFGISSTQLYHSVVKSLAKSHQWDKLFQFAKSK
KSPVGYELFFRECYLQNEKRQAGLYIGMCKELTYKARADLYLKIGEYRLAADEASKKKDI
DLLQLVKDTAGSTNVGITRLIEDYVTRIG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacccaagtttaggctgggaaagacttgatacagtcttttataggctgagagaa
tgctattcccctcttcaatgggatattgagcttgatgaacagcctgtagcgatctccaat
tctgcagctgcaattgcagtgttcaacagtcattcttcgcatacatccatagatatcttc
tctggatctggagtattgctcaattccattccgtggctactttccaatggtcaaattgtt
tcaatgagctggacagacaacgaagaactgctggttgttcttcagaacggtactattcga
aagttctcagacctgaccagtgagtttgatgagtttggacttaatcttcctgaggactcg
atagtgcaagaggccaaatttttccaggatggtattgttgtacttacaaatgaaaagaaa
tttgtatttttcagctctttcagtcaagtacccaggcatttcactcttaacgtagattcc
atagactgctggaatatcctctactcggatcgggtattacaactgtttgtttcttccaac
aaatcaattcacataagcacactgacgacagaaacatcagtaaaatttgggcaggttatt
actggaatcgagtttcctcctaatggttcgtttgcatctcttttgaccccagataactta
atcatagcaacgtctgacttggagaacttattgtcagagttttcacacaattttaaacac
attcgttccatgcagtggtgtagtaatgatgctgtggtcctagctactaatgacgagctg
caggtaattggtccaggtgatgattccatttctttttactatgaaaacaggccattcata
aggtcacagaatgatggcttaactgtacttactcaatccaagctggagtttctatctaga
gttgcaaatttcactgaagaaactttcagaattggttccactaaggcaagtgcaatttta
ctagattccattgatcaattggatagacattccccaaaagctgatgaaaacttgagaata
gtgaaaccaaatttggtggaagcagtcgataattgcattcgttcagcaagtgaagagttt
gatccgcaatggcaaaagaaactgttacgagctgccagttttggtaagagtatcttggat
ttctatagtagtgaagagtttgttgagatttgcaacaatttgagagttcttaatgctgtt
cggcaacctgaggtaggcatgtttatcacatatgctcagttgctgaattatggacaccaa
gggctaattcaatctttgatcagaaggcgcttgtttttattggcttctaagatctgcaaa
ttcctttcttcttttccagataacatatactttgcttgggccaagttaaagataaagagt
tcatacaatactaatgacaaagaattaagcgagataattcttgacaagttagctgagact
aaaagggtctcttatactgggttaagcgaggttgcttacaacgaagggagagtcgaactg
gcacatttgttactagatcatgaacctgtccttgagaatcaggtgcctcttttgttgcaa
atgggtcaggacaaaaatgctttgttaaagtctgaacaaagtggcaatgtggatttgata
tgttcggttctactacgtctgtattacaagttttccctgtcacaatttttcatactttta
tcagactcaactgatgtaagcattggtatttttaaagatataattggatccgtgaaacct
gatttactattagagtattactatcaggatgatcaactgattaagatagccgaatcgaac
ttgttacaggattcaacttattccttagatgcggaaaccaagcgaaatcgattattggag
ctgctgaaagcatatgaaggcaaaaaattttatgaaaatgatgtcccgatcatagaatct
cacttgaagctactcaattatcaagaaactttgactaacaagtttaaccactcttttgtt
gccttttcgaagattgaaactatttctgagttggccaggttggatgatgaaaagctaact
gaaacgcaaaagtatgcctatcaatttggaattagctcgacacagctttaccacagtgtt
gtaaagtcgttggccaaatcacaccaatgggataaactcttccagtttgccaaatcgaaa
aaatctcctgtggggtacgagttgtttttcagggaatgttacctccaaaacgaaaaaagg
caggctggactttacattggaatgtgcaaagaacttacttacaaagccagggccgatctt
tacttaaagattggtgaatacagactggcagcagatgaagcttccaagaagaaagatatt
gacctactacagttggtgaaggatacggctgggtctacgaatgttggcattacgagacta
atcgaagattatgtaaccagaataggatag
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