Komagataella phaffii: PAS_chr3_0244
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Entry
PAS_chr3_0244 CDS
T01092
Name
(RefSeq) RNA polymerase II subunit B12.5
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ppa
Komagataella phaffii
Pathway
ppa03020
RNA polymerase
ppa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAS_chr3_0244
09124 Replication and repair
03420 Nucleotide excision repair
PAS_chr3_0244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr3_0244
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr3_0244
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PAS_chr3_0244
DNA repair and recombination proteins [BR:
ppa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PAS_chr3_0244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
8199992
NCBI-ProteinID:
XP_002492460
UniProt:
C4R3Z5
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:complement(join(492700..493003,493063..493115))
Genome browser
AA seq
118 aa
AA seq
DB search
MNAPDRFELFILPDDVPKLKITPDSRVPNCIIIKFEREDHTLANLLREELALYPDVTFVA
YKVEHPLFANFVMRLQTEEGTRPKQALERACASIINKLKTLDHKFNEEWNIKNFSLND
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccagacagatttgagctctttatacttcctgatgatgttccaaaattaaag
attacaccagactctagagtacctaattgtatcatcatcaagtttgaaagagaagaccat
acattggccaacttattgagagaagaactagctttgtatcctgatgttacgtttgtggcg
tataaagttgagcatcctctttttgccaactttgtcatgagattacaaacagaagagggc
actaggccgaagcaagctttggaaagagcctgcgcaagtattatcaacaaactaaagaca
ttggatcacaagttcaacgaagaatggaacattaagaatttttcattgaatgactaa
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