Komagataella phaffii: PAS_chr3_0265
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Entry
PAS_chr3_0265 CDS
T01092
Name
(RefSeq) Non-SMC subunit of the condensin complex (Smc2p-Smc4p-Ycs4p-Brn1p-Ycg1p)
KO
K06677
condensin complex subunit 1
Organism
ppa
Komagataella phaffii
Pathway
ppa04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PAS_chr3_0265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr3_0265
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
PAS_chr3_0265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
HEAT
Adaptin_N
HEAT_2
RTP1_C1
SCD
HEAT_ECM29
TPR_TTI1_C
F-protein
Motif
Other DBs
NCBI-GeneID:
8200093
NCBI-ProteinID:
XP_002492482
UniProt:
C4R417
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Position
3:complement(join(525717..526296,526353..529153))
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AA seq
1126 aa
AA seq
DB search
MDFTFVVSEALTEFQATEKGQLTLEDSHSKLEEVTDALALSPEAIGRSEIFDLLKDLVLA
SPTLNQKQRDQIGYLICSTISSIAKNTSTLIESGEVDSFPVYKKYLELYGFLMHCHLTFL
ALEDHSAAVTTQKIRRATKKDVDLFKNHCLQLENALEATCTVFGVNLERLFETTPERDLF
VNLFTRPVYLLMESEQRIKVTSVKLHIFKVICIGIRNHGHAPAAESSILQNLTYFLHLAV
IMAELLDNLSEQYNYSQLTDEILRNVSLKEFNPNDANGPRSISLFIAKLSELNPRLVLRQ
MTFIAQLLDNSSHMLRCAVVEACGNIVITLAKDDISLENHQSQIETLLKLLEQRFLDQNP
YVRTKAIQALLKLCELKERFSRRRYRFLKLAVRSLNDRNPLVRRNAIKLICKVILTHSFS
AMHGPQLGLSVWQKRLVDIQEQINSLDGSFSSELIPTGDANNTSNTINLEQDQDFEGDIT
MRTIEEDSTMPTPGSSEQDADKDEHNEKEVVDYEALNKLKLTHQYYKDAIKFIKTIHRGT
KLAAVILYSKNRTEVLETMDFFVLADAYGIEIAELGVKKMLHLVWIKNNNDEGTSVSSHL
MECYKQLFFTTPATATPLEKATYIASNLVALTKSASASDLASLEKLLCMMYTSTENDLID
DNTIKVLWKIYQAKDNSVSIEQKHGSIIILSMLSLADNQIALRGLDQLLNIGLGGEKVED
MILARFSCVAIQRMVPQGKKIGHEKFTLERKDEIINKLVDMAVMYSEDGEWYGAAEHALN
AIFIISSHPIEVGSSLLKKKIETTFGEVLQEKTRIRNLTQLLFLVGHISIKTIVYLEKCE
AEFKRRKLEASSSQGKQKPDESKEVENELEMIGGTSEDDFSDAIAFIKEKELLFDENSLL
AKFGPLVKEICANNLEYQNTELQRSAVLCLEKFMKNSPDPIIRSNAVLGLGDMAVCFNNL
VDENTDFLYRRLHDDNIMVQRTCLMTITFLILAGQLKVKGQLATMAKCLENEDQGISDMC
KLFFTELAAKDNAIYNGFIDMFSGLTNDKTLEKDAMKRIIKFLVPFIGKERHQKQLAQKL
LHRLEKVETEDQWNDVAFVLQSLPLKNNEQVQEALAEGFKVVQARS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggatttcactttcgttgtctctgaagctctcaccgagtttcaggccacagaaaagggt
cagcttactttggaagattcacattcaaaattggaagaagtcaccgatgccctagccctt
tccccagaagcaataggtagatccgagatctttgatctcttgaaagatttggtgctggca
tctccaacgttgaaccaaaagcaaagagaccaaatcgggtatttgatctgctctactatc
agcagtatcgccaagaacacatctaccttgatcgagagcggagaagttgactcgtttcct
gtctataagaaatatctggaactctatggatttctaatgcattgtcatttaacctttcta
gcgttggaggaccactcagccgcagtgactacacagaaaattcgaagggctacgaaaaag
gatgttgatctcttcaagaaccactgcttgcagttggaaaatgcactggaagctacatgt
accgtatttggcgtgaatcttgagagattgtttgaaacaactccagaaagagacttattt
gtcaacttatttactagaccggtttatctcctgatggaaagtgaacagcggattaaagtc
acgtctgtaaaacttcatatcttcaaagtaatctgtattggaattagaaaccatggccat
gctccagctgctgaaagctcaatactacagaatttgacctattttctgcatttggccgtt
attatggctgagttgctagacaacttgagtgaacaatataattacagccaattaactgat
gagatacttaggaatgtatccttgaaagagtttaacccaaatgatgccaatggcccacgt
tccatctctttgttcatagccaaattatctgagttgaatccaaggttagtattacgacaa
atgacattcatagcccagctgttggataatagttctcacatgttaagatgtgctgttgtg
gaagcttgtggtaatattgttataactttagccaaggacgatattagtttagaaaaccac
caatctcaaattgagactttgctaaagttgttggaacaaagatttttggaccagaaccct
tatgtgcgtactaaagcaattcaagcattgttgaaactctgcgaactgaaagaaaggttt
tccagaaggcgttacaggtttttgaaactagctgtcaggtctctgaacgatcgtaatccc
ttagtccgtcggaatgcaatcaaactaatatgcaaagtgatactgactcattctttctct
gcgatgcatggcccccaacttggcctctctgtatggcaaaagagacttgtggatatccaa
gaacaaataaatagcttggacggatctttttcgtctgaactaataccgacaggtgatgct
aataatactagtaataccatcaatttagagcaggaccaagattttgaaggggatatcaca
atgcgtacaatagaggaagactctacgatgccgactccgggatcttcggagcaagatgca
gataaagatgaacacaatgaaaaggaagttgttgactacgaggcgctaaacaaactcaaa
ttgacacatcaatattataaagatgctattaagtttattaagacaatccatagaggtacc
aaattggcagctgtaattctttattcgaaaaacagaacagaggttcttgaaacaatggat
ttctttgttttagctgatgcctacgggatagagatagctgagcttggagtcaagaaaatg
ttacacctcgtttggattaagaataacaacgacgaaggaacaagtgtatcttcccattta
atggaatgttacaaacagttattttttactacgcctgccacggccactccactagaaaag
gccacttacattgccagcaacttagttgcgttgacaaagtcagcatctgcctcagattta
gcatctttagaaaagcttttgtgcatgatgtacactagtactgagaatgatctgattgat
gataacacaataaaggttttatggaaaatatatcaggctaaggacaatagtgtctcgata
gagcagaagcatggctcaataatcatcctcagtatgctttcattagctgataatcaaatt
gcactaagaggtctagaccaattgctaaatattggtcttgggggtgaaaaagtcgaagac
atgattttggccaggttctcatgtgtggctattcaaaggatggtgcctcagggtaaaaaa
attggacacgagaaattcacactagaaagaaaagatgagataatcaataagcttgtcgat
atggcagtgatgtactctgaagatggtgaatggtatggtgcagctgagcatgctctcaat
gcaatttttatcatttcttctcatccaatcgaagtcggttctagtttattgaagaaaaag
attgaaacgacttttggagaggtacttcaagagaagacaagaatacgaaacctgacgcag
ctactatttttggttggtcatatctctattaaaacgatcgtatatcttgaaaagtgtgag
gcagaatttaagcgtcgaaaattggaagctagttcctcacaaggtaaacaaaagccggat
gagagtaaagaagtagagaatgaactggaaatgatagggggaacctctgaagatgatttt
tctgatgctattgcttttatcaaagagaaggagttattgttcgatgaaaattctctactc
gcaaagtttggtcctcttgtcaaagaaatttgtgccaacaaccttgagtatcaaaatacc
gaacttcaaaggtctgcagtattgtgcttggagaagttcatgaaaaactcccccgatcct
attattcgaagtaatgcggtactgggtcttggagacatggcagtatgtttcaataatttg
gtggatgaaaatactgacttcctatatcgtcgacttcacgatgataatatcatggtccaa
cgtacatgtttaatgaccataactttcttaattttagcaggccaattgaaggtcaaagga
caactagcaactatggccaaatgtttggaaaatgaagatcaaggaatatctgacatgtgt
aaactgtttttcaccgaacttgctgctaaagacaacgctatctacaacggatttatagat
atgttcagtggactgacaaacgataaaactcttgaaaaggacgcaatgaagagaatcatc
aagttcctagttccatttattggcaaagagagacaccaaaaacaattagcccaaaagttg
ttgcatcgtcttgaaaaagtggagaccgaagatcaatggaacgatgtggcgtttgtctta
cagtcactccccctgaagaacaatgaacaggttcaagaggcacttgcggaagggttcaaa
gtagtacaggctaggtcttga
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