Komagataella phaffii: PAS_chr3_0301
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Entry
PAS_chr3_0301 CDS
T01092
Name
(RefSeq) Component of the GARP (Golgi-associated retrograde protein) complex
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr3_0301
Membrane trafficking [BR:
ppa04131
]
Protein recycling
Others
EARP complex
PAS_chr3_0301
Endosome - Golgi transport
Tethering complex
GARP complex
PAS_chr3_0301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
Motif
Other DBs
NCBI-GeneID:
8200128
NCBI-ProteinID:
XP_002492521
UniProt:
C4R456
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Position
3:598400..601021
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AA seq
873 aa
AA seq
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METEDYDPKIDLWKLLDTPNSLRQLDDLLNYTSGYKRVLDNSISLNITEYKGFQEMMGDE
TKLENLETDIVDLISSFTKTWELADDTEKAIQSMTGNIRKLDNCKRNLTLSMTVLKRLQM
LIGAFYNLTDLLKNNAKNYSMIYQLLSVVLELMQHFQSYKSIDEINDLNRTISRIKNQIV
DGIFSDFEDLSSNPNPELLYACKTLDSLGPAYRSKLINWYVNLQLKEVNSIFGPTEEAGS
LSNLGRRFIFFKRLLMQLENQTSKVFPKDWKIELVLAQKFCEATKSDLNRVIARERASNT
SGSLDTTLLMNSLEETLDFEAHLNQKFKYYDDSNIESTKAVPVFDRMISEVFEPQLQFWM
DYQDSKLNERFSQFLTPDNLLKKTGPLSDDKSALDDSSINVLDSSTELFRVYRQLLVQLS
KLSHGEPLLNLSNMFVKYLYQYKNQVLQPLIPPAKKISSLTTEEASQVLPHICLILNTAD
YCCSTISQLEERLSKLIEDPKISERMGFDPVKESYLVLINSCLNLLLLKLDRDLDMSWRE
FTNENWKNLTEVTGESRFLTSVKRTVMENCTVLFRNFDKERYIRNFTDRVIELIITDFTA
QIVKIIPIHEIVAEQLLLDLQSLRSLFLDIPNLSPKQTELTNTKPIVSSRMFKKFVDTNV
NNLERILKMVMTRTKPFDNFVQSYFMVIGDKKFDNFFKILILNGTISLPRGFSNAASHHA
SLQNERLKYQDIFNQQLLAYEDGDTEQEQLEESFAFLDNFDIDRYRKNLYKPTVDTVPQV
EGNVTFSPNSTTSPTAKTISNFFNNIGHSNTDSIDDQFIDSGINSLAKKIDKQAIINTKE
NLEKNLARTFSGDHKLNINENFKNFSKLFGKKN
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaggattatgatcccaagatcgatctttggaaactcttggacacacccaat
tcgctgcgtcaattggatgatttgctcaattacacttcagggtacaagagggtcttagat
aacagtatttccctcaacattacagagtacaagggttttcaggaaatgatgggggatgaa
acaaaattagagaatttggaaacggatatagtcgacctcatatcttcatttactaaaact
tgggagctcgccgatgatacggagaaagcaattcaatcaatgactggaaatataagaaaa
ttggacaactgcaagagaaacctaacattatctatgacagttctcaaacgattgcaaatg
ttgattggtgcattttacaaccttaccgatcttttaaagaataatgccaaaaactattca
atgatttaccagctgctcagcgttgtgttggagttgatgcaacattttcaaagttacaaa
agtatagatgagataaatgatttgaacagaaccatttctagaattaaaaatcagattgtt
gatggaatattttcagatttcgaagatttatccagcaaccctaacccagaattactctat
gcttgtaaaacattagattcgctgggacccgcgtatcgatcaaagttgattaactggtac
gtcaatctacagcttaaagaagttaattccatttttggccccacagaagaagcgggatct
ctttccaatttggggagaagattcattttctttaagaggctattaatgcaacttgaaaat
caaacaagcaaagtgtttcctaaggactggaaaatagaactagttctggctcaaaaattt
tgtgaagctacaaaatcagatctgaatcgagtgatagctcgcgagagggcaagtaatact
tcaggttcacttgatactaccttattgatgaattctttagaggaaactttagattttgaa
gctcatttgaatcaaaagttcaagtattatgacgattccaacattgaatctacaaaagcg
gttcccgtttttgatcgaatgatctcagaagttttcgaacctcagttgcaattttggatg
gactaccaggacagcaaattgaatgagagattttcgcagttcttgacacctgacaatctt
ctcaaaaaaactgggcctttgtcagatgacaaatcagcgttggatgatagttcaataaat
gtcctggactcatcaacagagcttttccgtgtctatcgtcagcttttagtacaactttca
aagctttctcacggtgaaccattactgaatctctcgaatatgtttgtcaagtatctttac
cagtataaaaatcaagttttacagccgttgatccctcctgcaaagaagataagttctttg
accacagaagaggcgtcgcaggtattgcctcacatttgcctcatcttaaacacggcagat
tattgttgttccacaatttctcaattagaagagcgactttcgaagttgattgaagatccc
aaaatttctgaaagaatggggtttgatcctgttaaggaatcttatcttgttctaatcaac
agctgtctaaatctactgttgctaaaactagaccgtgatcttgatatgagttggagagag
ttcactaatgaaaattggaagaacttgaccgaagttactggagaatctcgattcctgaca
tcagtaaaaagaacagtcatggaaaattgcacagttttgtttagaaactttgataaggaa
agatatattcgtaatttcacggacagagtgattgaattgatcattacagactttactgct
caaatagtgaagattattcccatacatgaaatagttgccgaacagttacttctcgatttg
caatcattacgatcccttttcttagatattcccaatctgtcacccaaacaaacagaactg
actaatacaaaaccaatagtgagctctaggatgttcaagaaatttgtggacactaatgtc
aataacttggaacgaattttgaagatggttatgacaagaacaaagccttttgataatttt
gttcaaagttattttatggttataggggacaagaagtttgataatttttttaagatctta
attctaaacggcaccatttccctacccaggggattttcaaacgctgccagtcaccatgcc
tcgttacaaaacgaaaggttgaagtatcaggatattttcaaccagcagcttttagcttac
gaagatggagacactgagcaggaacaacttgaagagtcatttgcatttttggataacttc
gatattgatcgttacagaaagaatctttataaacctacggtagataccgtgcctcaagtg
gaaggcaacgttactttctcgcccaattccaccacttcaccaacagccaaaacaatctct
aattttttcaacaacatcggacattccaacaccgattctattgacgatcaatttattgat
tcgggtatcaactcgttagccaagaagattgataaacaggcaattataaatactaaagag
aatcttgaaaagaaccttgccagaacttttagcggtgaccataaactgaacattaatgag
aacttcaagaactttagcaaactgttcggaaagaaaaattga
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