Komagataella phaffii: PAS_chr3_0312
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Entry
PAS_chr3_0312 CDS
T01092
Name
(RefSeq) Component of the ESCRT-II complex
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ppa
Komagataella phaffii
Pathway
ppa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PAS_chr3_0312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr3_0312
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppa04147
]
PAS_chr3_0312
Membrane trafficking [BR:
ppa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
PAS_chr3_0312
Exosome [BR:
ppa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PAS_chr3_0312
Exosomal proteins of colorectal cancer cells
PAS_chr3_0312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Vps36-NZF-N
Zn_ribbon_10
zf-Sec23_Sec24
HVO_0416
bPH_2
Motif
Other DBs
NCBI-GeneID:
8200138
NCBI-ProteinID:
XP_002492531
UniProt:
C4R466
LinkDB
All DBs
Position
3:618158..619693
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AA seq
511 aa
AA seq
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MTWKKIKATQSGRPFFDDIDEVIVYIQDDIGLYQDNTKLDKFQTVRFYLTNKRLIFINEL
FPEENYYILLHEIQEVSLYQGFINSSPKLILDLVKTEGEETKRMYRISWICTICSFSNHV
QLDKPLAKFNEANNEINFKCSMCGIKPERLILKDGSSKADSFEPELKPVEATTASKRKHR
CPQCTFVNHPSMLNCEMCNFPLRDKDSFDDSDILLGSKDSTTFKLSFHDKKVQPFSDKLQ
HYIEKSQHDFLKRFNRMNMNVVQQPASPVGPSKETPKKGIHDLENNSSNFIDSSFLNDSL
SGLGRLMRHAEKLIRLSESMKPLMMNLHQCSHENHQLISLLKSNKPPHKINNGIIVESDT
KKSLYHKEVARQLVEFILNYDLVQNDFISLCELYKLYNKSRGLNLLSPSTFKLICEQLEN
VNSIVKLYQIEYHNNNSFYIISKTSSTNYNLSNKVNTLLEENPSDLKQLQIAMNNCNFSI
LKSVVDELCSEGVIVLDQSIGGNVYYINHYF
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggaaaaaaatcaaggctactcaaagcggtagaccgttttttgatgacattgat
gaagtcatagtttatattcaggacgacataggtctctaccaagataacactaagctggac
aagtttcaaacggtcagattctatctaacaaataagcgtttgatattcattaatgagctt
tttccggaggagaactattacatattacttcatgagattcaggaggtctccttgtaccaa
ggtttcatcaattcctcccccaaactaatacttgatttggttaagaccgaaggagaagag
acgaaaaggatgtacagaatttcctggatttgcacaatttgctctttcagtaaccacgtt
cagttagataaaccattggctaagtttaatgaggctaacaacgaaatcaattttaaatgc
tctatgtgtggtataaaaccagaaagacttatactaaaagatggatcctctaaggcagat
tccttcgaacctgagctcaaacccgtagaagcaacaacagcgtccaagagaaagcacagg
tgtcctcagtgtacgtttgtcaatcatccttcaatgctgaattgtgaaatgtgtaatttt
cctttgagagataaggatagctttgatgattcagacattctacttggatccaaagactca
accacgttcaaattgtcttttcatgataaaaaagttcagccttttagtgataaacttcag
cattatattgagaagagccagcatgattttctcaagcggttcaataggatgaacatgaac
gtcgttcagcaaccagcttcccctgttggtccttcaaaggaaactccaaaaaagggtatc
catgatctagagaataattcctcaaatttcattgatagttcttttcttaatgattctctg
agtggtttagggagactaatgagacatgctgaaaagcttattcggctaagtgaatccatg
aaaccattgatgatgaacctgcatcagtgttcacatgaaaatcatcagttgatttccctg
ttaaagtccaacaaacctccccataaaatcaacaatggaattatagtggaatctgataca
aagaaatcactttatcacaaagaggttgcccgacaattggtagaatttattttgaattac
gatctggtgcaaaacgactttatctcattatgtgagctgtacaagttgtacaacaaatcc
agagggctcaatcttttatctccttcaactttcaaactcatctgtgaacaacttgaaaat
gtaaactcaatcgtgaagttgtatcagattgaataccacaacaataacagcttttacatt
atttcgaaaactagttccaccaattacaacctgtcgaacaaagtcaatacgttgttggag
gaaaatccgtcagatttgaaacaacttcaaatcgctatgaacaactgtaacttctccatt
ctcaaatctgtcgtcgatgaactctgcagtgaaggtgtgattgtattggatcagtcaatc
ggaggcaatgtatattacataaatcattatttttaa
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