Komagataella phaffii: PAS_chr3_0324
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Entry
PAS_chr3_0324 CDS
T01092
Name
(RefSeq) Component of the commitment complex
KO
K13095
splicing factor 1
Organism
ppa
Komagataella phaffii
Pathway
ppa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PAS_chr3_0324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppa03041
]
PAS_chr3_0324
Spliceosome [BR:
ppa03041
]
Complex A
Other components
Complex A specific factors
PAS_chr3_0324
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
zf-CCHC_2
KH_1
zf-CCHC_3
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
8200148
NCBI-ProteinID:
XP_002492541
UniProt:
C4R476
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All DBs
Position
3:639080..640456
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AA seq
458 aa
AA seq
DB search
MEGQLVERTRGRPSERRSANKWGEVKNRILTRIKYPTNIVGQLTPEQLDAFQLVFRIEEI
TQKLETHQVVPEEKLRSPSPTPIYNSNGKRINTIDIRYTEKLEKERHVLVERAMKTVPGF
TAPINYKRPGKTSEKLYLPTKDYPDINFIGLLLGPRGNTLKKLQDESGAHIGIRGKGSVK
TGRNNNAAGSHQSHMDDELHCLITSESQEKIKKAVALCNEIIEKAIVSPEGQNDMKRGQL
RELAVLNGTLRTTENRACTLCGELGHLRHDCPKKQSFTQTVVCRNCGQTGHFARDCKFSG
FENERAEDREIDQMMNDLNGDAPSYNMKTLNSSTEPGSVPIPQQDQINNLFQNPSKRPHI
DDEASESKRPAIKAPLGLSVSVDPQPIQSLPFPPGAGNSSFLPPPPPPMAGSSIPPPPPP
AVTTKLPPPPPPPVSTRKPPPPPPPSVPTAKPPPPPPQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccagcttgtagaaagaacaagaggaaggccctctgaacgacggtcagccaac
aaatggggagaggtgaagaaccgaattctcacaaggattaaataccctacgaacatcgtt
ggccagttaacgccagaacaactagacgccttccagttggtctttaggatagaggaaata
acacagaagctagaaacacatcaagtcgtacctgaagaaaaacttagatcaccttctcca
actcccatttataacagcaacggtaagagaatcaataccattgacataagatacactgaa
aaattagagaaggagagacatgtcttggtggagagagcgatgaaaactgtgcctggattc
accgcccccatcaactacaagagaccaggaaaaaccagtgaaaaactctatttacctacc
aaagattatccggatattaatttcataggactgctcttgggcccccgaggaaacacattg
aagaaattacaggacgagagtggtgcccatatcggaatcagaggaaaaggatcggtcaaa
acaggtaggaacaataatgctgcaggctcacatcaaagccatatggatgacgaattacac
tgtttgataacttcagaatctcaagaaaagatcaagaaggccgttgctctgtgcaatgag
ataattgaaaaggcgattgtcagccctgaagggcaaaacgatatgaagagaggtcaacta
agagagctagcagttctcaatggtactttgagaaccacagaaaatagagcatgtacgcta
tgtggagaactgggccaccttagacacgattgccctaagaagcaaagctttactcaaact
gtagtgtgtcgaaattgtggacaaactggacattttgctagggactgtaagtttagtggc
tttgaaaatgaaagagcagaggatagagaaattgatcagatgatgaatgacctcaatggg
gatgctccgagttacaacatgaaaactctgaattcgtccaccgaaccaggttcagttcca
attccccagcaagatcaaattaataatttgtttcagaatcctagtaagagacctcatatt
gatgacgaagcatctgagtccaagcgacctgctattaaggctccgttggggttgagtgtt
tctgttgatccacaacccattcaatctctaccgtttcctccaggtgccgggaattcatcg
tttctaccacctcctcctcccccaatggctggatcaagcataccaccaccaccccctcca
gccgtgacaacaaagctaccgccaccaccacctcctccagtaagtacaaggaagccccct
cctcctccaccgccttcagttcctactgcaaagccacctccacctccgccacaatga
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