Komagataella phaffii: PAS_chr3_0352
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Entry
PAS_chr3_0352 CDS
T01092
Name
(RefSeq) Putative SCF-ubiquitin ligase F-box protein
KO
K10295
F-box protein 9
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppa04121
]
PAS_chr3_0352
Ubiquitin system [BR:
ppa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
PAS_chr3_0352
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FBO_C
MIT
Raf1_HTH
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
8199485
NCBI-ProteinID:
XP_002492573
UniProt:
C4R4A8
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Position
3:696575..697663
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AA seq
362 aa
AA seq
DB search
MTLDSQLQTLSIKSDGAVDLSKLDDKQRRAYDLFHQANEKEMEGAMSDAVELYRKAYKLD
EKVDRWYRYQDITKQASPHNKNTIEKPAVDLELVKKINVQELLNSFNEDQITPEEENEPS
PLHLLSDDLLIYIMELLCDADSSSWFYFAITCKKLSYLGFHNKSIWEKLCKIVYSRQRYD
EDTPCSQDQICQNTWKGDWHLMLSQRPFLKFNGAYISIINYYREGGRPDMSNSWSNPIRC
VTYYRFVRFYPDGTCQRLLTFLSPKIVVPRLNKNYHELGLENVFRGTWKMTMDGQVLITG
EGSVEGYSFSETLQIKNLGRMKHHKLHWISAYFQNKDDGEMKHFSLAKERPFTFSRVKSY
SV
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttgatagtcaactccaaacgctttcaattaaaagtgatggagctgtggacctc
tcaaaactagacgacaagcaaagaagggcctatgatctatttcaccaggccaatgagaaa
gaaatggagggtgcaatgagcgatgctgttgagctttatagaaaggcctataaactagac
gaaaaagttgatcgctggtaccggtatcaagatattacgaagcaggcttctccccacaac
aagaataccatagaaaaaccggccgttgaccttgaactagttaaaaagattaatgttcaa
gagttattgaatagtttcaacgaagatcaaattacacccgaggaagaaaacgagccgtca
ccattacatttgctttctgatgacttgttgatatatataatggaacttctatgcgacgct
gactcatccagctggttttactttgcaatcacttgcaaaaaactatcgtatctcgggttc
cataacaaatcaatttgggagaaactttgtaaaattgtttattccagacaacggtacgat
gaagacactccctgcagccaagaccaaatatgtcagaatacgtggaagggcgattggcac
cttatgctaagtcaaagaccttttttgaaattcaatggtgcatatataagtatcatcaat
tattatagagaagggggaaggccagacatgtcaaactcatggtcaaacccgataaggtgt
gttacttattatcgatttgtgaggttctatccagatggtacatgccaaaggttgttgacg
tttttaagccccaagatagttgttccaagactaaataaaaattatcacgaactgggctta
gagaatgtgtttcggggcacttggaagatgaccatggatggccaagtactaatcacaggg
gaaggctccgtggagggatacagtttttcagagacacttcagatcaaaaacctggggcga
atgaaacatcacaaattacattggatatctgcatatttccagaataaagatgatggagaa
atgaagcatttttctttggcaaaagagagaccattcactttcagtcgggtcaaatcatac
tctgtgtag
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