Komagataella phaffii: PAS_chr3_0376
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Entry
PAS_chr3_0376 CDS
T01092
Name
(RefSeq) Cytoplasmic and mitochondrial glycyl-tRNA synthase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ppa
Komagataella phaffii
Pathway
ppa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PAS_chr3_0376
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppa01007
]
PAS_chr3_0376
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_chr3_0376
03029 Mitochondrial biogenesis [BR:
ppa03029
]
PAS_chr3_0376
Enzymes [BR:
ppa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
PAS_chr3_0376
Amino acid related enzymes [BR:
ppa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PAS_chr3_0376
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PAS_chr3_0376
Mitochondrial biogenesis [BR:
ppa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PAS_chr3_0376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
DUF4895
Thiamine_BP
4HB_MCP_1
DraK_HK_N
Motif
Other DBs
NCBI-GeneID:
8200215
NCBI-ProteinID:
XP_002492599
UniProt:
C4R4D4
LinkDB
All DBs
Position
3:complement(735564..737525)
Genome browser
AA seq
653 aa
AA seq
DB search
MTSQETTAFTFSREKLESVLKRRFFFAPAFEIYGGVSGLYDYGPPGCAFQANIVDVWRKH
FILEEDMLEVDCTMLTPLEVLKTSGHVDKFSDWMCRDLKTGEIFRADHLIEEVLEARLKG
DQEARGQVVSEGKSDDKKRKKKVKEIKAIKLDDDVKEEYEQILAKIDGYSGEEMGELIVK
HNIGNPATGDPLEPPIEFNLMFETAIGPSGNLKGFLRPETAQGQFLNFSKLYDFNNEKMP
FASASIGKSFRNEISPRAGLLRVREFLMAEIEHFVDPEDKSHSKFDLVKDIKLNFLSKST
QIEGKTECAIKSIGEAVSEKMVDNETLGYFIARIYQFLITIGVDPSRLRFRQHMDNEMAH
YAQDCWDAELLTSYGWIECVGCADRSAYDLSVHAARTNEKLCVREKLPEPITVDRLEIDI
EKKKFGPKFRKNAGAVEKWLLARTECELETLQKDLSTDGKILVEIPGIEEKIELDDSLIH
IERRTRTEHIREYTPNVIEPSFGIGRIIYSIFEHAFYPRPDDADRCVLKLPPIVAPTKVL
LVPLQTNAEFKPIVKEISQVLRKEKIPFKVDDSGASIGKRYARNDELGTPFGITIDFDTI
ADGTVTLRERDSTTQVRGSVADIVKAIKTITYDGLSWETGTKDLKPFESKSEE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgcaagagacaacagctttcactttttcaagagagaagttggaaagtgttttg
aaacgaagattcttcttcgcaccagcttttgaaatttatggtggtgtttctggtctttat
gattatggtcctccaggatgtgcctttcaggccaatatcgttgatgtttggagaaaacac
ttcattttagaagaagatatgctggaagttgactgtaccatgctgactccgttggaagtc
ttgaagacatctggccatgttgataaattttcagactggatgtgcagagatttgaaaact
ggagaaattttcagagctgatcatttgattgaggaagttttggaagctagattaaagggt
gaccaagaggctagaggtcaggttgtctctgagggaaaatcagacgataagaagagaaag
aagaaggtcaaggaaatcaaggctatcaaactggacgatgatgtaaaggaagagtatgaa
cagattttggctaaaatcgatggctattctggtgaagaaatgggtgaattgatagtcaag
cacaatatagggaaccctgctaccggtgacccattggaacccccaattgagttcaaccta
atgtttgaaaccgctattggtccatccggtaacctgaaaggtttcttgcgtccagagact
gctcaaggtcagttcttgaactttagcaagttgtacgacttcaacaatgagaaaatgccc
ttcgcctctgcttccattggtaagtcatttagaaatgaaatttctcctagagcagggctg
cttagagtaagagaatttttgatggcagaaattgagcacttcgtggatccagaagacaaa
tctcattccaagttcgatctcgtcaaggatatcaagttaaactttttatctaaatctact
cagattgaaggtaagacagaatgcgccatcaagtccattggtgaggctgtttctgaaaag
atggttgacaatgaaactttgggttattttattgctagaatctaccagttcttaattact
attggtgtcgatccttctagactgagatttagacaacatatggacaatgagatggcacat
tacgctcaagactgctgggatgcggaactgcttacctcttacggctggattgaatgcgta
ggttgtgctgatcgttccgcttatgacttatccgtacatgctgcaaggactaatgaaaag
ctctgtgtcagagagaagcttccggaaccaattactgttgacagactggagattgatatt
gagaagaaaaaatttgggccaaagttcagaaagaatgcaggcgctgttgaaaaatggttg
cttgctagaactgagtgtgaactagaaactctacagaaagatttgtcgacagatggtaaa
attctggttgaaataccaggtattgaagagaagattgagttggatgattcactgattcat
attgaaagaaggactagaactgaacatatcagagagtacactcctaacgtgatcgaacct
tcattcggtattggacgtataatctattctatttttgagcatgctttctacccacgtccc
gatgatgctgacaggtgtgtgttgaagttgccacccattgtagccccaaccaaagtgttg
cttgttcccttgcaaaccaatgccgagttcaagcccattgtgaaggaaatctcccaagtt
ttacgtaaagaaaagattcctttcaaagttgatgattctggggcatcgatcggtaagaga
tatgctagaaacgatgagctcggtacaccatttggtatcactatcgattttgataccatc
gctgacggaacggttactctgagagaaagagattcgaccactcaagtcagaggcagcgtc
gcagatatcgtaaaggctatcaagactattacatacgatggtttatcctgggaaactggc
accaaagatttaaaaccttttgagagtaaatctgaggaatag
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