Komagataella phaffii: PAS_chr3_0398
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Entry
PAS_chr3_0398 CDS
T01092
Name
(RefSeq) Translation termination factor eRF3
KO
K03267
peptide chain release factor subunit 3
Organism
ppa
Komagataella phaffii
Pathway
ppa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PAS_chr3_0398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr3_0398
03012 Translation factors [BR:
ppa03012
]
PAS_chr3_0398
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PAS_chr3_0398
Translation factors [BR:
ppa03012
]
Eukaryotic type
Release factors
PAS_chr3_0398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
TFIIA
FlpD
Motif
Other DBs
NCBI-GeneID:
8200219
NCBI-ProteinID:
XP_002492625
UniProt:
C4R4G0
LinkDB
All DBs
Position
3:complement(777404..779515)
Genome browser
AA seq
703 aa
AA seq
DB search
MQSVLISVVFRQLSVNFPSSSSATVNKNFTRTVSFPFSKEMSKQQDNNDLSQGVGNIDLN
RKNEQRFNPNSASSFQPSFNPQAQNFVPGQYQESQSYQNYQGYQSYQQNQGFQAQPGYQQ
PYQQGYQAYQGYNNFYQPPAEPQTKAMSLEDYNKQKEQSKNSLNAKPKRTLKLSSSSGIK
IGGKKEEPKTETKPETKTEAKTDPKPAQKEEPKVEVPKAKSENKIESNTESKTDSKAGSK
TESKSASKVESKASLAADTLPKEDDINEEVINDLFGGKDHISILFMGHVDAGKSTMGGNL
LYLTGSVDKRTIDKYEKEAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGRAYFETEKRRY
TILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAMNQGVSK
LAVVVNKMDDTTVNWSKERYDECTAKLAAFLKAIGYKKEDVLFMPVSGYTGAGLKEPVNP
TECPWYKGPTLLSYLDSIDIQNRKVNGPFMLPIAGKMKDLGTVVEGKIESGHIKKGSTLI
MMPNRVSVEVLTIYNETEEEADQAISGEQVRLRIKGVEEEDVSNGYVLTSPNTPIKTVTR
FEAQIAFVELPSIVSTGFSCVMHVHTAIEEVTIVQLKHKLEKGTNRRSKKPPAFAKKGMK
VIAVLETPEPVCVETYEDYHQLGRFTLRDQGATIAIGKITKLL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcgtgctgatatccgtagtttttcgtcaactttctgtcaattttccttctagt
tcctccgcgactgtgaacaaaaattttactcgtaccgtctcttttcccttctctaaagaa
atgtcgaagcaacaagacaacaacgacctgtctcagggagtgggcaatatagacttaaac
aggaagaatgaacaacgtttcaatcctaacagtgcttcctcgtttcagcctagcttcaac
cctcaagcccagaactttgttcctggtcaatatcaagaatcccaaagttatcaaaactac
caaggttatcaaagctaccaacagaatcagggatttcaagctcagcctggctaccagcag
ccctatcaacaggggtatcaagcgtaccaaggttataacaacttctatcaaccaccagct
gaacctcagactaaggccatgtctttggaggactacaacaaacagaaggagcaatccaag
aactctttgaatgcaaaaccaaagagaactttgaagctaagctccagttctggaattaag
ataggaggtaaaaaggaagaaccaaaaaccgagaccaagcctgaaactaaaactgaggca
aagactgacccaaagcctgctcagaaggaagagccaaaagttgaagtacctaaagcgaag
agtgaaaacaaaatagagtctaacactgaatccaagaccgacagcaaagctggatcgaaa
accgaaagcaagtcggcatcaaaagtagagagtaaggcaagtctcgctgccgatacgctc
cccaaagaagatgacataaatgaagaggttatcaacgatttgtttggtggaaaagatcat
atttccattctttttatgggtcacgtcgatgcaggtaaatctaccatgggtggtaatcta
ctctacttgaccggctctgtggacaagagaactattgataagtatgagaaagaagctaaa
gatgctggtagacaaggttggtacctatcgtgggtgatggacaccaacaaagaagaaaga
aatgatggtaaaacaatcgaagttggaagggcatatttcgaaactgaaaaacgccgatac
accatcttagatgcccctggacacaaaatgtacgtttctgaaatgattggaggtgcttct
caggctgatgttggaattttagttatttctgcgagaaagggtgaatatgaaactggattt
gagaaaggtggtcagaccagagagcatgctttactagcaatgaaccaaggtgtcagcaag
ctcgcagtcgttgtaaacaagatggatgacactactgtcaactggtccaaagagcgctat
gacgagtgcactgcaaaacttgctgcattcctgaaagctattggttacaagaaggaagat
gttttattcatgcccgtttctggatacactggtgcaggattgaaggagccagttaatcca
actgaatgcccatggtacaaaggaccaactctattatcttatttagacagtatcgatatt
caaaacagaaaagttaatggtccatttatgttgcctattgctggaaagatgaaagattta
gggactgttgttgaaggtaaaattgaatctggtcacatcaagaaaggaagtactttgatt
atgatgcctaacagagtctccgttgaggtgttaaccatatataatgagactgaagaagaa
gctgatcaggctatttctggcgagcaagttcgtttgcgtataaaaggagtggaagaagaa
gatgtgtctaacggttatgtcttgacttcccctaacactcctatcaaaacagtgactcgt
ttcgaagctcagattgcatttgttgagctcccatctattgtttccactggattctcatgc
gtcatgcacgttcatactgcaattgaagaggtgactattgtgcaattgaaacataagcta
gaaaagggcaccaatagaagatccaagaaacctccagcttttgctaagaagggaatgaaa
gtgatcgctgtacttgaaacccccgagcctgtatgtgttgagacttacgaggattatcat
cagctcggacgtttcactcttagagatcagggagctacaattgccattggtaaaattact
aaattgttgtaa
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