Komagataella phaffii: PAS_chr3_0400
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Entry
PAS_chr3_0400 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K12880
THO complex subunit 3
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
ppa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PAS_chr3_0400
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr3_0400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr3_0400
03041 Spliceosome [BR:
ppa03041
]
PAS_chr3_0400
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
PAS_chr3_0400
Spliceosome [BR:
ppa03041
]
Complex C
Other components
EJC/TREX
PAS_chr3_0400
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PAS_chr3_0400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_Aladin
RMC1_N
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_WDR36-Utp21_1st
CFAP251_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_pof12
DSE1_N
Beta-prop_NOL10_N
Peptidase_S9_N
Beta-prop_WDR19_2nd
Tricorn_2nd
PD40
Lactonase
Beta-prop_TEP1_C
PH_SPO71
DUF8395
Motif
Other DBs
NCBI-GeneID:
8200220
NCBI-ProteinID:
XP_002492628
UniProt:
C4R4G3
LinkDB
All DBs
Position
3:complement(782572..783606)
Genome browser
AA seq
344 aa
AA seq
DB search
MTNPSLARDKQLFTDLKSTELNDGSLENHRTSTDIITLEFNKGNRLAYSRSDKTLCIWKR
FKENVWDSLLQINTTSNKPVYCIAWDTVDELIFVTVAKDSTAQIWQLNGSNTQCKCLKTI
QTPSPKNSNFIAKISPDGKYLVIASFNNTISFYDFQSKHEPVFLFQYTFNENVYDLQWDS
KSRFLLFTLSNGTAPIYSITKDSGGLRFSLLQTLSGHNASVTSVAITGDRIILGTNEGIV
SIWDLSTLVCISVDSSIDVPVTSVQASYDGDYLLITYEHHNARIIRLSPFSKDSETILEL
ENSSRGIYSAKFSSTRLALAYTGMNNNCVVLGRKEHSKRRYRGS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacccttcactagctagggacaagcagctttttactgatctgaaatcaacggag
ttgaatgatggctctttagaaaatcaccgaactagcactgatatcatcactttagaattc
aacaagggaaatagattggcgtattcaagatctgataaaaccctctgcatatggaaaagg
ttcaaggaaaatgtatgggactctttattgcagatcaatacaacctctaacaagccagtc
tattgcattgcttgggatacagttgatgaactgatatttgtcaccgtcgccaaagattcg
acggctcaaatatggcaacttaatggttccaacactcagtgtaaatgtttgaagacaatc
caaacccctagcccaaaaaactccaacttcatagccaagatatctcccgacggaaagtat
ttggttattgccagcttcaataacacaatatcattttacgatttccaatcgaaacatgaa
ccagtttttcttttccagtacacttttaatgagaacgtgtatgatttgcaatgggactct
aaatcaaggtttctactattcacgcttagcaatggtacagctcctatatactcaattact
aaagattcaggaggattgcggtttagtttgttgcagacattatcgggccacaatgcctct
gtcacttcagtggccattactggagatcgcattattcttggaacaaatgaaggaattgta
tctatatgggacctttcgacgttagtctgcatttctgtcgattcatccattgacgttcca
gttacctcagtacaagcttcatatgatggtgactaccttttgataacctatgagcatcac
aatgcaaggataataaggttgtctccgtttagcaaagactccgagacgatactagagtta
gaaaactcaagcaggggaatttattccgcaaaatttagcagtacacgtttagccctggct
tatactgggatgaacaataattgcgttgtgttggggaggaaggaacattccaagagacgg
tatagaggtagttag
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