KEGG   Komagataella phaffii: PAS_chr3_0400
Entry
PAS_chr3_0400     CDS       T01092                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
ppa  Komagataella phaffii
Pathway
ppa03013  Nucleocytoplasmic transport
ppa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PAS_chr3_0400
  09122 Translation
   03013 Nucleocytoplasmic transport
    PAS_chr3_0400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppa03019]
    PAS_chr3_0400
   03041 Spliceosome [BR:ppa03041]
    PAS_chr3_0400
Messenger RNA biogenesis [BR:ppa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     PAS_chr3_0400
Spliceosome [BR:ppa03041]
 Complex C
  Other components
   EJC/TREX
    PAS_chr3_0400
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PAS_chr3_0400
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_RIG_2nd EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_Aladin RMC1_N Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_WDR36-Utp21_1st CFAP251_N Beta-prop_WDR36-Utp21_2nd Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_pof12 DSE1_N Beta-prop_NOL10_N Peptidase_S9_N Beta-prop_WDR19_2nd Tricorn_2nd PD40 Lactonase Beta-prop_TEP1_C PH_SPO71 DUF8395
Other DBs
NCBI-GeneID: 8200220
NCBI-ProteinID: XP_002492628
UniProt: C4R4G3
LinkDB
Position
3:complement(782572..783606)
AA seq 344 aa
MTNPSLARDKQLFTDLKSTELNDGSLENHRTSTDIITLEFNKGNRLAYSRSDKTLCIWKR
FKENVWDSLLQINTTSNKPVYCIAWDTVDELIFVTVAKDSTAQIWQLNGSNTQCKCLKTI
QTPSPKNSNFIAKISPDGKYLVIASFNNTISFYDFQSKHEPVFLFQYTFNENVYDLQWDS
KSRFLLFTLSNGTAPIYSITKDSGGLRFSLLQTLSGHNASVTSVAITGDRIILGTNEGIV
SIWDLSTLVCISVDSSIDVPVTSVQASYDGDYLLITYEHHNARIIRLSPFSKDSETILEL
ENSSRGIYSAKFSSTRLALAYTGMNNNCVVLGRKEHSKRRYRGS
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgaccaacccttcactagctagggacaagcagctttttactgatctgaaatcaacggag
ttgaatgatggctctttagaaaatcaccgaactagcactgatatcatcactttagaattc
aacaagggaaatagattggcgtattcaagatctgataaaaccctctgcatatggaaaagg
ttcaaggaaaatgtatgggactctttattgcagatcaatacaacctctaacaagccagtc
tattgcattgcttgggatacagttgatgaactgatatttgtcaccgtcgccaaagattcg
acggctcaaatatggcaacttaatggttccaacactcagtgtaaatgtttgaagacaatc
caaacccctagcccaaaaaactccaacttcatagccaagatatctcccgacggaaagtat
ttggttattgccagcttcaataacacaatatcattttacgatttccaatcgaaacatgaa
ccagtttttcttttccagtacacttttaatgagaacgtgtatgatttgcaatgggactct
aaatcaaggtttctactattcacgcttagcaatggtacagctcctatatactcaattact
aaagattcaggaggattgcggtttagtttgttgcagacattatcgggccacaatgcctct
gtcacttcagtggccattactggagatcgcattattcttggaacaaatgaaggaattgta
tctatatgggacctttcgacgttagtctgcatttctgtcgattcatccattgacgttcca
gttacctcagtacaagcttcatatgatggtgactaccttttgataacctatgagcatcac
aatgcaaggataataaggttgtctccgtttagcaaagactccgagacgatactagagtta
gaaaactcaagcaggggaatttattccgcaaaatttagcagtacacgtttagccctggct
tatactgggatgaacaataattgcgttgtgttggggaggaaggaacattccaagagacgg
tatagaggtagttag

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