Komagataella phaffii: PAS_chr3_0420
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Entry
PAS_chr3_0420 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K18712
THO complex subunit HPR1
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr3_0420
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
PAS_chr3_0420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
8199552
NCBI-ProteinID:
XP_002492648
UniProt:
C4R4I3
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All DBs
Position
3:817643..819919
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AA seq
758 aa
AA seq
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MLSGYDEYSSSIIPALETDLVVLRERFSSDQIFSSSINNHPDLTAIYTKHFEDKFTEEDQ
TSTISFKSAVIENVVLNVLFNVIEKNESTEVLVTEILILLDLAIHGYNKQVYKSLPLIIV
LQAFAKLDIDIICDKLGPILLGPHSNERKRILQQNGSLIGKKSPGLVLLSYSQKILNRLF
KHIESHELFGGYFRTFIRTSFALDDSLLPTRKWETNVNTKTFLTGLQKQLRQTRGVSSAE
NKLNRKMQEDFKRFVDLMIFLNDPVPLIEADKRGRTFRHLSDMENSLNFVFEFLKTLIDM
DKKQKHGIRLQNQSFFLPETQRSDREIAQVVEHYTRKLLQLEIPVTAELFQKQLNDYTFR
QLILLQVVVGATYILSLKKKEVDDRIARLRKATKDPKLAQQLHNKMPAVIYDRDLSDACS
NLRNTILKHYKEFDSNFYETLQSIAASEESWIDWKLLQYSLAIIETGKFDSHVTLFNEQL
PSLYEYAPQYSHKLGTPQLSRIWKIETSLPHLKNHSFDKEEFVEDIRMELYPLDSQLQQP
DLDSKHKEEIQGQKDYLNWKSMRFLRSNNEWLKLKQTNEKVGLEGMFDDGLLMDEDFEEE
IPSEVKEMMEKIQQEENEKIEKQKKEEADELEQEQTKNEADKLETQESQVAPEEKRDEET
TNDAAEKGLPEKLEPSQIDESPVENKSPAIQSPRTASPASETPKLSYEDTKLQSDDESST
KQPSSTSQADLSNDLEGVQKKRKLSTDSELPTAKKLKP
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgctatcgggttacgacgaatactccagttcgataattccagcattggaaaccgacttg
gtagtattgagggaacgtttttcatccgatcaaattttctcctcatctatcaacaaccat
ccagatctaacggctatatacaccaagcattttgaagacaagttcacggaagaagaccag
actagcaccatcagttttaaatctgccgtaattgaaaacgtagtattgaacgtcctcttc
aacgtaattgaaaagaatgaaagcactgaagtattagtgacagagattctgatactgtta
gatttggcaatacatggatataataagcaagtctacaaaagtttgccattgattattgta
ttgcaagcgtttgccaaattggatattgatataatttgcgacaaattgggcccaattttg
ttaggtcctcactcaaatgaacgcaaaaggatcctgcaacagaatggatctttgatcgga
aaaaaatcacctggtttagtgctattaagttattctcaaaagatattaaacagattattc
aaacacattgaatcacatgagctatttggtggatactttagaacgtttatcagaactagt
tttgctcttgatgactccttactgcccacgaggaaatgggaaacgaatgtcaacactaaa
acttttctgacgggtttgcaaaagcaattgagacaaactagaggtgtatccagtgctgag
aataagctgaatagaaaaatgcaagaagacttcaagcggtttgttgatttgatgattttt
ttgaatgatcctgtgcctctaattgaagccgacaaaaggggaagaactttcaggcattta
tcagatatggagaactcattgaattttgtttttgagtttttgaagactctcattgacatg
gataagaaacaaaaacacgggattagattgcagaatcaaagtttttttctacctgaaacc
cagagatcggacagagaaattgcacaagtggttgaacattataccaggaagttgcttcag
ttagaaattcctgttactgcggagctctttcagaaacagctcaacgattatacattcaga
caattaattctcctacaagttgttgttggagctacatacattttatcactcaagaaaaaa
gaagttgatgacaggattgccaggttaaggaaggccacaaaggatccaaaactggcgcaa
cagttacacaacaaaatgcctgccgtaatatatgatagggatttatctgatgcatgttct
aatcttcgaaacacgatattaaagcattacaaagagtttgatagtaatttttacgaaacc
ttacaaagcattgccgcatcagaagagtcctggattgattggaaattgcttcagtactct
ctagcaattattgaaacgggaaagtttgatagccatgtcactttattcaatgaacagctg
ccaagtttgtacgaatatgctccacagtactctcacaagcttgggacacctcaattatca
cgaatatggaaaattgaaaccagtttaccgcatctaaagaaccacagttttgataaagag
gaatttgttgaagatattagaatggaactatatccactagattcccaattacaacaaccg
gatttggattctaaacacaaggaagaaattcaaggtcagaaagactatttgaattggaaa
tcaatgagatttcttagatcaaataatgaatggctgaaattgaaacaaactaatgagaaa
gttggacttgagggtatgtttgatgatggtcttttgatggacgaagattttgaggaggag
attccctccgaagttaaagagatgatggaaaagattcaacaggaagagaatgagaaaata
gagaaacaaaagaaagaggaggctgatgaattagagcaagaacaaactaagaacgaagcc
gataaattggaaacccaagaaagtcaagtagcgcctgaagaaaagagagatgaagaaaca
acgaatgatgctgcagagaaaggtttgccagagaaacttgaaccgtcccaaattgatgag
tcgccagtagaaaacaaatcaccggcaattcaatcccccaggactgcatctccggccagc
gagacacctaaattgagttatgaagacacaaagctacagtctgatgacgaatcttccacc
aagcaaccaagctccacctcacaagccgatctttcaaacgatcttgagggagttcaaaaa
aagcggaagctatcgacagactcggaattgcccacggcaaaaaaactcaaaccttga
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