KEGG   Komagataella phaffii: PAS_chr3_0442
Entry
PAS_chr3_0442     CDS       T01092                                 
Name
(RefSeq) Lsm (Like Sm) protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
ppa  Komagataella phaffii
Pathway
ppa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PAS_chr3_0442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppa03019]
    PAS_chr3_0442
Messenger RNA biogenesis [BR:ppa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PAS_chr3_0442
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PAS_chr3_0442
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 8199570
NCBI-ProteinID: XP_002492668
UniProt: C4R4K3
LinkDB
Position
3:859462..859935
AA seq 157 aa
MTQNQNRSQTAGLSDVFQNDSEKDLYLESYMYTTAAALVGSIDKIVTVTLREGRVFIGIL
RTFDQFANLVLQDTVERIYIGDDKYAEAPQGVFLIRGENVSLVGEIDLDQQDKDLEKRSQ
IPFPEAQRIRKELVAAKQAKTTKERELMLSKGFEPQS
NT seq 474 nt   +upstreamnt  +downstreamnt
atgacccagaatcaaaatagatcacaaacggccggtttgtcggacgtttttcagaacgat
tctgagaaggatctttatctggagtcgtatatgtacactacagcagcagccctcgttgga
agcattgataaaatagtaacagtaacacttagagagggtcgtgtctttattgggattctt
cgaacatttgaccagtttgccaacttggtgctccaagataccgttgagagaatctatatc
ggtgatgataaatatgcggaggctcctcaaggggtctttttgatcagaggtgagaacgta
tccttggttggagagattgaccttgaccagcaagataaggatttagagaagagatcccag
attccctttccagaagcccaaagaattcgcaaggagctggttgctgctaaacaagctaag
acgaccaaagaacgagaattaatgttgagtaaagggtttgaaccccagagttag

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