Komagataella phaffii: PAS_chr3_0715
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Entry
PAS_chr3_0715 CDS
T01092
Name
(RefSeq) Nuclear pore membrane glycoprotein
KO
K18725
nucleoporin POM152
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr3_0715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr3_0715
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PAS_chr3_0715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_Pom152
Ig-like_POM152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
8200413
NCBI-ProteinID:
XP_002492944
UniProt:
C4R5C9
LinkDB
All DBs
Position
3:1365420..1369298
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AA seq
1292 aa
AA seq
DB search
MDFGSQRRRHRSVQRALVPEYILDVGSQRLFMISLFGLIQAWKVYDIMILKNESLRELLS
KDSWISFSIPELNFVVKYLVLDGLFLWCLPVLKIPLLNFSILTTLIQITLMAAITILLSS
DMSMPLAGILMSFWNLFFPKKELALLEDYIPTAEFEDQSPHLKGRTTIKYLPDSSAKLNP
FYESHCMTNIYTDKIQMPIRFNSTSNLEFVQLEYRSFSNEVSYLNYTKKDLRRMLNRDST
ELFKKEYAFNGNLYHSYRDDSNVISFIEVPLTQPGLYSLHQVYDSKLKRVRIAKNEVFIV
SCPSAQLYNTKPDEHYCVGENQEVSAKIFGVPPLKVVYHAEIGNKLLNTNSVDIIDEDVE
SPLTKLQGLELKEQALKISTSIDKRKSLEWARTKSFTAPLSRGKIDEAGSYIYTLHQVID
GFGNRINYVPEVANNNLFYQFEAHPIIKGDLEEKDKKLVILQGSPKELLVSLDVSNAKKE
APYTVEIEFTSEDKKTKDIITKVFEASQVTRNKLPFQVKSPGTYTLKSIRSKFCQGEVGP
SILTVTEAFAPSLNISSNPILDACIGTTGYKFDLQFLGTPPFEVDYKVYRLDSQNPNRVL
TTKDVSTIIAKSNNEVFNYEPNTEGTYAIEFIGIRDKYYKKLPRLEKGKHRYTTYLKQRT
RAGFVQDRKLQDVCNGDSASVLIKFDGKPPYKVNYEISDPLNQSQNFTVDSIMDNEYRIE
MKDLLQGGTYNIKLLDVKDESNCNVVFQKSHAQVNVRKHKPHLQFGNAGKFELVEGQSLN
IPLKSDTEKSISLHYTITDPNNPSLVKHTRISSLNPNKGLSVKSQGIYRLVGFNESVCPG
IISSDSEVEISYKKKPSLKLLPSEDTIVGDNTNSWKLKPFCQGKKGYLDLLLEGEAPFFI
EYAIKHPGGFLESKLDTTSRKKFSISLRSDIGGDYVYTILGIYDSVYFKSAIKELEKQSA
YKFEPVLIDHHVYPLPDAHFITDRDAPEHHNPHLQADKKFSSFRRSSIYQTCLSNLNKRS
LLRPLSISLSGQAPFQLKLKLFHEKSNTEEFVYLSDLPHEVEYYDIYSNLDIGNHVVSIV
EVTDSGRCKQSDFTEHEMVAIHVNDIPKIEQISTISKDSKSLREDELEYCVGDQVAYSLS
GVPPFKISYEFDGISQVAEVNKKTFKRRAYRPGKLTIASISDSSSKDCLVQLQDRADLEA
VIYDIPSVEMTTGDSYLEGIHEGDKVELIFKLTGSPPFTLKYVRTDLKGKHANKEVIENI
MDHEVRVWANMEGNYEPIEIQDAHCKAEKKVY
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggactttggttctcaaaggagaaggcatagatctgtacagagagcacttgtcccggag
tatatacttgatgtgggttctcagcgattgttcatgatctcattgtttggattaatccaa
gcgtggaaagtgtacgatattatgatcttgaaaaatgagagtttgagggaattgctgtcc
aaagattcctggataagcttctccattccagaactgaattttgtcgtgaagtacttagtt
cttgatgggctatttttatggtgtcttccggttttgaagataccactgctaaacttctcc
attttgacaacgttgatacagataacgttgatggccgcaataacaattctattaagctct
gatatgtcaatgccattggctggtatactaatgtcattctggaatctcttcttccccaag
aaagaacttgccctgcttgaagattacatcccaactgcagagtttgaagaccaatctccc
catttaaagggtagaactacgatcaagtatttaccagactcttcagctaaactcaatccc
ttttatgaatctcattgtatgacgaatatctatacagacaagattcagatgccaataaga
tttaattctaccagtaatcttgaatttgtgcaactggaataccgaagtttttcaaacgaa
gtttcatatctaaattacaccaagaaagacctgcgcagaatgcttaacagggattctact
gaactattcaaaaaggaatatgctttcaatgggaatttgtatcattcctaccgggacgat
tccaacgtgatctcatttattgaggtgccgttgacgcagcctggattgtacagtttgcat
caagtctatgattccaaattgaaaagggttcgcatagccaaaaatgaagtattcattgta
agttgcccttctgctcaattatacaatactaaaccagatgaacactactgtgtgggagaa
aatcaagaggtaagtgccaagatcttcggtgtgccacccttaaaagttgtttatcatgca
gaaattggcaacaagctattaaacactaactcagttgatatcattgatgaggatgtcgag
tctcctttgactaagctccaaggattggagttgaaagaacaagctctcaaaatatctacc
tctattgataaaagaaaatctttagaatgggccaggaccaagagcttcacagcgcctctg
tcaagagggaaaattgatgaagccggttcatatatttatacccttcatcaggtcatcgat
gggtttggtaatcgcatcaattatgtcccagaagtggcgaacaataatctgttttatcaa
tttgaagctcatccaataataaaaggagatctggaagagaaagataaaaaactggttatc
ctccaaggtagcccgaaagaactgttggtctccttggatgtctccaacgctaaaaaggag
gccccctatacagttgaaatagagttcaccagtgaagacaagaagactaaggacataata
acaaaggttttcgaagcatctcaggtgactaggaataaacttcctttccaagttaagagc
ccaggtacgtacaccctcaagtcgatcagatctaaattttgtcaaggagaggttggacct
tcgatactcactgtcaccgaagcatttgccccctcccttaacatttcaagtaatccgata
cttgatgcctgtatcggaacaacaggttataagtttgatcttcagttccttggtacccct
ccatttgaagttgattataaagtctatcgattggattcgcaaaatcctaacagagtgcta
accacaaaagatgtttcaaccatcatagcaaagtcaaataatgaagttttcaactacgag
ccaaatactgagggtacttatgccatagaatttattggcatacgtgacaagtattacaag
aaacttcctcgccttgaaaaagggaagcatcgatatacaacctacttgaaacaaaggact
cgagctggattcgtccaagatagaaaactgcaagatgtctgtaatggtgactctgcctct
gtcctcatcaaatttgatggaaaacccccatacaaagtcaactatgagatatctgacccc
cttaatcaatcgcagaactttacggttgactccattatggacaatgaatacaggattgaa
atgaaagatcttttgcagggaggaacgtataatattaaactgcttgatgtcaaagatgag
tcaaattgtaatgttgttttccagaaatctcacgcccaggtaaatgttcgaaagcacaaa
ccacatttgcagtttggaaatgcaggaaagtttgagctggttgaaggtcagagcttgaac
attccgttgaagagtgatactgaaaagtcaatttcccttcattatacaatcactgatcct
aataacccttcattggtgaaacacacacgtatttctagcttgaacccaaacaaaggattg
tctgtaaagagtcaaggcatataccgcttagtgggattcaatgagtctgtatgtcccgga
attatatctagcgacagcgaagttgaaatttcatacaagaagaaaccatcgttgaaactg
ctaccttcggaggatacaatagtaggtgacaatacgaattcctggaaactgaaaccgttt
tgtcaagggaaaaagggctatttagatttattacttgaaggtgaagccccctttttcatc
gagtacgctatcaagcaccctggaggattcttggagagcaagctagacaccacatccaga
aaaaagttttccatcagtttgcgatcagatattgggggtgattacgtttataccatacta
ggcatttatgattctgtctatttcaaatctgctataaaggaactagaaaagcagagtgct
tacaagtttgaaccagtcttaattgatcatcatgtctatcctttgcctgacgcccacttc
attacagatagagatgctcctgaacatcacaatcctcatttacaagctgacaaaaaattt
tcctcattcagaaggtccagcatttatcaaacatgtttgtccaaccttaataaaagatct
ctattgagaccactatcaatatccttatctggacaggcgccattccagcttaaactgaaa
ctttttcacgagaaatccaacactgaggaatttgtttacctatccgacttaccacatgaa
gtcgagtattacgatatctattctaatttggacattggaaaccatgtagtgtctatcgtg
gaagtgactgattccggacgttgcaaacagagcgatttcactgaacacgaaatggttgcc
attcatgttaatgatattccaaagattgagcagatttcaactatttcaaaagattccaag
tccctaagagaagatgaactagaatactgtgtaggagaccaggttgcttattcgttgtca
ggggttcctcccttcaaaatatcctacgaatttgatggcatttcccaagtagctgaagta
aacaagaagactttcaagcgacgtgcttatcgacctggaaaacttacaattgccagtatt
tcagactcctcatccaaggactgtttagtccagcttcaagacagagcagacctggaggct
gtcatttatgatattccctccgtggaaatgaccaccggagactcctatttggaaggtata
catgaaggggataaagtggagttgattttcaagttaactggatctccaccctttacctta
aagtacgtcagaacggatctcaagggaaaacatgccaataaagaagtaatagaaaacatc
atggatcatgaagtccgagtatgggcaaacatggaaggaaattatgagcctatcgaaatc
caagatgctcattgtaaagctgaaaagaaggtatattag
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