Komagataella phaffii: PAS_chr3_0722
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Entry
PAS_chr3_0722 CDS
T01092
Name
(RefSeq) ubiquitin-40S ribosomal protein S31 fusion protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
ppa
Komagataella phaffii
Pathway
ppa03010
Ribosome
ppa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PAS_chr3_0722
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PAS_chr3_0722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppa03011
]
PAS_chr3_0722
04121 Ubiquitin system [BR:
ppa04121
]
PAS_chr3_0722
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppa04147
]
PAS_chr3_0722
Ribosome [BR:
ppa03011
]
Ribosomal proteins
Eukaryotes
Small subunit
PAS_chr3_0722
Archaea
PAS_chr3_0722
Ubiquitin system [BR:
ppa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
PAS_chr3_0722
Exosome [BR:
ppa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PAS_chr3_0722
Exosomal proteins of colorectal cancer cells
PAS_chr3_0722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
DUF2604
Cytochrome_C7
Plexin_RBD
TBK1_ULD
UBL_UBAC1
Ubiquitin_5
Zf_2nd_IFT121
OTU1_UBXL
DUF2096_N
Motif
Other DBs
NCBI-GeneID:
8199650
NCBI-ProteinID:
XP_002492949
UniProt:
C4R5D4
LinkDB
All DBs
Position
3:complement(1377546..1377998)
Genome browser
AA seq
150 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGGKKKKKKNYTTPKKIKHKHRKVKLAVLNYYKVDDDGKIERLRRE
CDTCGAGIFMANMSDRQYCGKCHTTIKLSK
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattttcgtaaagacccttaccggtaagactatcaccttggaggtggagtcttcc
gacactattgacaacgtcaagtccaagattcaggacaaggagggaattcctcctgaccaa
cagcgtctgatctttgctggtaagcaattggaggatggtagaactttgtctgactacaac
atccaaaaggagtctactttgcacttggtccttagattgagaggtggtggtaagaagaag
aagaagaagaactacaccaccccaaagaagatcaagcacaagcacagaaaggtcaagttg
gctgtcttgaactactacaaggttgatgacgatggaaagatcgagagattgagaagagag
tgcgacacctgtggtgctggtatcttcatggccaacatgagtgacagacagtactgtggt
aagtgccacaccaccatcaagctttctaaataa
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integrated database retrieval system
