KEGG   Komagataella phaffii: PAS_chr3_0782
Entry
PAS_chr3_0782     CDS       T01092                                 
Name
(RefSeq) Nucleolar protein, component of the small subunit (SSU) processome
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
ppa  Komagataella phaffii
Pathway
ppa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PAS_chr3_0782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppa03009]
    PAS_chr3_0782
Ribosome biogenesis [BR:ppa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PAS_chr3_0782
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Utp13 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_DCAF4 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_NWD2_C WD40_like Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_RIG_1st VPS8_N Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_NOL10_N Tricorn_2nd Utp12
Other DBs
NCBI-GeneID: 8199659
NCBI-ProteinID: XP_002493016
UniProt: C4R5K1
LinkDB
Position
3:1501900..1504281
AA seq 793 aa
MNSTSLRSTFAATDLEAIYVGGCAATMNEVGTILATAVEEDVVISNVETNTVLHRLEGDG
EIVTALQLTPDGRYLGVVSQSQQLRIFNLESEQFVTNFKLSSPAYIAAVDPTSTLFAFGG
SDGIITVFDIENGYVTHSLKGHGTTVCSLVFHGELNGGNWRLASGDTTGTVKIWDLVKRK
AIRTINEHNGAVRGLAFNADGERLLTGGRDKIVILWNTKTWKQLLVLPVKHQVESCQFTD
NHTIFTAGGDCILKLWSLNNGKMINSTEKPLETSEELIITGVLAAQPKGSLYLVLSDQTL
VEIDVSIISEGSPLTEIRRIAGNHGTIADMRYVGPELNLLALATNSPGLRVIDPVNKSLE
MQLYEGHRDLLNALDVSLDGNWVVSASKDHDARLWFYNGGRFVNVAVFIGHAGPVTAVAL
SRTSTGVPHFIVTASTDLTIKKWKLPKHFERDIEELEEPFTVKVSEFTRRAHEKEINAID
VAPNDQFFATASYDKTAKVWHIDTGETVGILKGHKRGLWDIRFCLYDKLIVTASGDKTCK
VWSLQNFTCLKTLEGHTNSVQRCQFFNKNNQIVTTGADGLIKIWDKSSGECIKTLDNHDN
RIWALCLKNDGFNFVTADADGKFSFWEDVTDATLKEEEENRKARVEQEQSLANYVSNKDW
NNAFLLALTLDEPIKLYKVLKASISTNEDPESVLGSFALEKTIKGLAFDQITLLFKRIRD
WNTNSRYFEVAQKLIKVILKGCNLKELIEVPGVVKFIEGIIPYSERHFSRIDDLLEQTYT
LDYAIQEMDKLTV
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgaatagtacaagtttgaggtctacatttgcggccaccgatttggaggctatttatgta
ggaggatgtgctgccacgatgaacgaagtcggtacgatactggctaccgcagtcgaggaa
gatgttgtgatcagcaatgtcgagacaaataccgtacttcaccgcttggaaggggatggc
gagatagtgactgcccttcagttgacccccgatggcagatatttgggggttgtgtcccaa
tctcaacagctcagaattttcaacttagaatcagaacagtttgtcacaaatttcaagctt
tcttcgccagcatacatcgctgccgtggatcccacctctacactgtttgcatttggagga
agtgacggtataattacagtatttgatatcgaaaacggatatgtgacacatagtctgaag
ggacatggtacgactgtgtgctcgctagtttttcacggagagctaaatggaggtaattgg
agattggcaagtggagatactacaggaactgttaagatctgggacctggtcaagcgcaag
gctatcagaacaatcaatgagcataatggcgcagttagaggtttggcgttcaatgctgat
ggcgaacgtttgttgaccggtggaagggacaaaattgtgatactttggaatactaagacc
tggaagcagttgttggttttaccagtgaagcaccaggtagagagctgccaattcacagac
aatcatacaattttcactgctggtggcgattgcatactaaaactatggagtctcaataat
ggaaaaatgataaactctactgagaagccactagagaccagcgaagagcttatcattacc
ggagttttagctgctcagccaaaagggtctctttatcttgtcctatcagatcaaacgcta
gtagagattgatgttagcatcattagtgagggttctccactaacagaaatcaggagaata
gcgggtaatcatggaaccattgcagacatgagatatgttggccctgaattaaaccttcta
gcactggcaacaaactccccaggtttaagagtaattgaccctgttaataaatcgttagag
atgcaactatacgaagggcacagagatttgttgaatgcgctggatgttagtttggacggt
aactgggttgtatctgctagcaaagaccatgacgctcggttgtggttttacaatggcgga
cgatttgtcaatgtggcagtttttatcggccatgcggggcctgtcacggctgttgctcta
tccaggacttcgactggtgtaccccactttatcgtaacagcatctactgacttaaccata
aagaaatggaagcttcccaagcattttgaaagagacatagaagaactggaagaaccattt
actgtgaaggtttctgaatttaccagaagagctcatgaaaaagaaatcaatgctattgac
gttgcacccaacgatcagttttttgcgactgcaagttatgataagaccgcaaaggtgtgg
cacatcgatactggagagactgttggaatcctcaagggtcataagcgaggtctttgggac
atacggttctgcctctacgacaaactgatcgttacggcatctggagataaaacctgtaag
gtgtggtccctgcagaatttcacctgtttaaaaactttggagggacataccaactccgtc
caaaggtgtcaattcttcaacaagaacaaccagatagttaccactggtgctgacggactg
atcaagatctgggataagtcatccggtgaatgtatcaagacgcttgacaatcatgacaat
agaatttgggctttatgtttaaagaatgacgggtttaattttgttacagcggatgcagat
ggaaagttcagtttttgggaagacgttaccgatgcaactttgaaagaggaagaggaaaac
cgtaaagcccgtgttgagcaggagcagtctttggcaaattatgtttccaataaagactgg
aataatgctttccttttggcgctaactttagatgagcctatcaaactgtacaaagtcttg
aaagcatccatttctaccaacgaagacccagaatctgttcttggatcttttgctttggaa
aagactattaaaggtttagcgtttgatcagattaccttattgttcaagagaatcagagac
tggaacaccaattcaagatactttgaagtagctcaaaagctgatcaaagttatcttgaag
ggatgcaatttgaaggagttgattgaagtgcctggagttgtcaagttcattgaaggaatc
attccgtatagtgaacgtcacttctccagaatagatgaccttttggaacagacttatacc
ttggattacgcaattcaagagatggacaaattaacagtataa

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