Komagataella phaffii: PAS_chr3_0933
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Entry
PAS_chr3_0933 CDS
T01092
Name
(RefSeq) Ubiquitin-specific protease that specifically disassembles unanchored ubiquitin chains
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppa01002
]
PAS_chr3_0933
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppa04121
]
PAS_chr3_0933
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppa04147
]
PAS_chr3_0933
Enzymes [BR:
ppa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
PAS_chr3_0933
Peptidases and inhibitors [BR:
ppa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
PAS_chr3_0933
Ubiquitin system [BR:
ppa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
PAS_chr3_0933
Exosome [BR:
ppa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PAS_chr3_0933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
Motif
Other DBs
NCBI-GeneID:
8199679
NCBI-ProteinID:
XP_002493173
UniProt:
C4R608
LinkDB
All DBs
Position
3:complement(1824332..1826722)
Genome browser
AA seq
796 aa
AA seq
DB search
MACTHFNSADNIKAPTKGTPVFKDDCMLCFDTAFEPKGLDICLHCFQSFSRGDLNHTQLH
SALFDHTLYLNLKKVLKPKRERKEGEESPEKIAKLEIKDQSEEDLFNIQTALFCSSCDDQ
FPLKQEDLPASTNSIVETVLHSSSNERKEEIKSWEQEILPCHHCFDIVQQPIEDLDLTQC
QSCDLKENLWICVVCGSLGCGRQQFGGIPGNSHALSHFESHENHNIAVKLGSLSSDSADC
YCYNCNDEVKVPELGKYLSRFGINIHEVVKTEKNLTELQIEQNVKWDFNMDQKDGKSLVP
VFGRELTGFKNLGNSCYLASVLQTLFSLRSYKEFFLNRDFPIDRLTTPNTDLNIQLIKIA
DGLLSGRYSIPDYSTTEEIKFQRGIKPFGFKNLIGQNHPEFSTMKQQDAYEFWLYIMDKI
DELYVSEENPPNSPLHFVLENKLKCSTCSSVRFIKEVTNSLALPVEDTVLDIDDDGRERY
QPVTFESCFKNWAQEEEIEHKCSFCQGEKLVKSQSLQTFPDVLTVSTERIKLKNWVPIKT
DVPILFKRAEEKTLERIDLSNLRSQGLLEGESLMPEDVSDSEETGFEPNPEAIQQLEAMG
FPNNRCLKALFNTGNLSAEDAMNWLFSHMEDPDIDSPFELPKDSSSSKPAIEPSQELVDN
LVSMGFTSKLAKKALILNNINIEAAVEWLFSNPDDDGEIPDGPPKAKSQEQQISELIVKE
SIKRPEYKLLAVICHKGITVHSGHYVVFIKKKIDGQPRWILFNDEKVVLADEANIKEMES
NGYLYIFAKVGSKDDL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcacacactttaatagtgctgacaacattaaagctccgacaaagggcactccg
gtatttaaagatgactgcatgctgtgttttgatacagcgttcgaaccgaaaggtctcgat
atttgcttgcattgctttcaatcattttccagaggcgatctgaaccatactcaactccat
tccgctctatttgatcacactttgtacttaaatttgaagaaagttctcaaacccaaaaga
gaaagaaaagagggcgaagaaagtccagaaaagattgccaaattagaaatcaaagatcaa
tcggaagaagatttatttaacattcaaactgcccttttttgctcttcgtgtgatgatcag
tttcccttaaagcaggaagatcttccagctagtactaattcaatagttgaaactgtcttg
cattcaagctccaatgaaaggaaagaagagatcaagtcttgggaacaagaaattctgccc
tgccatcattgttttgacatcgttcagcaacctatagaagatttagaccttacccaatgt
caatcatgcgacttgaaggagaacttgtggatatgtgttgtttgtggtagtctaggatgc
ggaaggcaacagtttggaggtattccgggaaattcccatgcgttgtctcactttgaaagt
catgaaaaccataatatcgctgtaaagctaggctctctatcctcagattctgcagactgt
tattgttataattgtaatgatgaagttaaagtgcctgaacttggcaagtacctatcaaga
tttggtatcaatattcatgaagtggtaaaaactgagaagaacctcactgaacttcaaatt
gagcagaatgtcaaatgggactttaacatggatcaaaaagatgggaagtcattggttcct
gttttcggtcgagaattgactgggttcaagaacttgggaaactcctgttatctcgcaagt
gttttgcaaacattgttctcccttcggtcgtacaaagaattttttctcaatagagatttc
ccaattgatcgattgactactcctaatactgatttaaacatacagcttataaaaatagcg
gatggacttctttcgggaagatattccatccctgattattcaacgactgaggaaataaag
tttcaacgtgggataaagccttttggattcaagaatttaattggtcagaatcatccagaa
ttttctaccatgaagcaacaagatgcttatgaattttggctttatatcatggacaagatt
gacgaattgtatgtgtctgaagagaatcctcctaactcgccgctccattttgtgctggag
aacaaattgaaatgttctacttgttctagtgtcaggtttataaaggaggtcacaaacagt
ttagccctccccgtggaagacacagtgttggatattgatgatgatggtagagaaagatat
caacctgtaacctttgagtcttgtttcaaaaattgggctcaggaagaagaaatcgaacac
aaatgttcattttgtcaaggggaaaaacttgtcaaaagtcagtcattgcaaacgttccct
gatgttttgacggtgtcaacagagaggatcaagttgaagaattgggtaccaatcaagacc
gacgttccaatcttgttcaaaagagcggaagaaaaaactttggaaaggatcgatctctca
aacctgagatcacaaggcttacttgaaggagaatcgttaatgcccgaagatgtttccgat
tccgaagaaaccggatttgaacccaacccagaagctatccaacaacttgaagcgatgggc
tttccaaataatcgatgtttgaaggctttatttaatactggcaacttgtctgctgaagat
gctatgaattggctctttagtcatatggaagatcctgatattgactctccatttgagttg
cctaaagatagcagcagcagcaaacccgcaattgaaccaagccaagaattggtagataat
cttgtttctatgggctttacgtcaaaattggcaaagaaagccctgatacttaataatatc
aacatagaagctgcggttgagtggttattttcgaatcccgatgatgatggagagattcca
gatgggccacccaaagcaaagtcgcaagaacagcagatcagcgagcttattgtgaaagaa
tccataaagagacctgagtacaaattattggctgttatatgccataaaggaatcactgtt
cattctggccattacgtggtgtttatcaagaagaagatcgatggacaaccaaggtggatt
ttgttcaatgacgaaaaggtggtgttggcagatgaagccaacatcaaggagatggagtcc
aatgggtatctttacatttttgcgaaagtgggaagtaaagacgatttatga
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