Komagataella phaffii: PAS_chr3_0990
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Entry
PAS_chr3_0990 CDS
T01092
Name
(RefSeq) Nexin-1 homolog required for localizing membrane proteins
KO
K17917
sorting nexin-1/2
Organism
ppa
Komagataella phaffii
Pathway
ppa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PAS_chr3_0990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr3_0990
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppa04990
]
PAS_chr3_0990
Membrane trafficking [BR:
ppa04131
]
Endocytosis
Macropinocytosis
Sorting nexins
PAS_chr3_0990
Domain-containing proteins not elsewhere classified [BR:
ppa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
PAS_chr3_0990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
HBM
Motif
Other DBs
NCBI-GeneID:
8199735
NCBI-ProteinID:
XP_002493231
UniProt:
C4R666
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All DBs
Position
3:1912601..1914583
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AA seq
660 aa
AA seq
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MNDEPLSGSHWDDNAPSSSIFNVPDEVDPTLNPFKEEDDEVVGALQEVSLESDAETVSKD
EERQPNLHEEDLDDNAANSFASGSNNDINTGVSGQDIEPDSQQQQEADIAKEQIKLKKTE
LLSSLTEGIEKEVKTSNFGPDGNLFGDTNTEELKSAMEASTTSPDRHTFSSSNRKKTVFR
PRPRRIGGKVVVPSEPQDDPLNSSKDDDLSNETEANRDAPSVGKLLIESVDEPLFNITKK
TIISPTVSPKKERKAAKPTSAIPDSNENMDRFDIVVDDPIKVGELTSAHVVYKIKTRTDS
ELVASKELSVTRRYRDFLWLYNQLVSNHPGFIIPPPPGKQVVGRFESKFIENRRLGLEKM
LVNISRDRSLQKDMDFIIFISSEKFQEESKQREVIHHHNMNSSTAVVSENDTMSSGASLN
NSGFMSSISNALSISAPKYVENDKYFIEKANYIEQLDQQLKNLLKTLDLITQQREELVTT
IEEFLNTINELIDLEVSNDVSAIFLELHNLQTKSKELLERTNMQEVLTLTTTLDEYVRII
GSIRIVFENRFKVINNLLNLKSQVATKEKKLNKAKTKQHNQVDKIQRYERELSALSNAVD
QETAKRDMIVDNVKKQLEIFEDKKVDDFRSMVEIYWESLIETQKEIIELWETFYEKCKFD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaacccctttccggatctcattgggatgacaatgcgccatctagttcgata
ttcaacgtgccggatgaagtcgatccaactttgaatccattcaaggaggaagacgatgaa
gtagtgggcgctctacaagaggtttcgttagaaagtgatgccgaaaccgtctccaaggat
gaggaacgccaaccaaatttgcacgaagaggaccttgacgataacgctgccaattctttt
gcttcggggtccaataatgacataaatacaggagtttctggtcaggatattgaacctgac
tcccaacaacaacaggaggctgatatagccaaggagcagatcaaactgaaaaagacagag
ctgttaagcagcttaaccgagggtattgaaaaagaagtgaagacaagtaactttggacct
gatggtaacctttttggtgacactaacaccgaagaacttaagtcagctatggaggcgtca
acaacttcaccagatcgtcatacattttcatcttcgaatcgaaagaaaactgttttcaga
cctagacccagaagaataggcggtaaggttgtcgttccttcagagcctcaagatgatcca
ttgaatagcagtaaagatgatgatctgtccaatgaaacagaagcaaatagggatgccccc
tctgttggaaagttgttgatcgaatcagttgatgaacccttattcaatattacaaagaaa
accataataagtccaaccgtttcccccaaaaaagaacgaaaagctgcaaaacccacgtcg
gcaattcctgactctaatgaaaacatggaccgctttgacattgttgttgatgaccccata
aaagttggagagcttacgtctgcgcatgttgtgtacaaaattaaaactaggactgattcc
gagttagtagcaagcaaggaacttagtgttactcgaagatacagagatttcctttggtta
tacaatcagctggtcagtaatcatccaggttttattatcccaccaccgcctggaaaacaa
gttgttggaagatttgagagcaagttcattgaaaacagaaggctgggcttggaaaaaatg
ctggtcaatattagtagggatagatcactgcagaaagacatggattttatcattttcata
tcaagcgaaaagttccaagaggaatctaaacagcgggaagttattcaccaccataatatg
aatagctccacagccgttgtcagtgaaaacgatactatgagttctggcgcttcattgaac
aattctggatttatgtcttcgatatcgaatgctctttctatttcagctcccaaatatgtt
gagaacgacaagtactttattgaaaaagctaattacattgagcaattggatcaacagctg
aaaaatctcttaaaaaccttagacttgataacccagcagagagaggaattggtgaccacg
attgaagagtttttgaacactataaatgagctcattgacttggaggtgagtaatgatgtt
tcagccattttcttggagttacacaatctacaaaccaagtcgaaggagctacttgaaaga
accaatatgcaagaagtgctaactttaactaccactcttgacgagtatgtgcgtataatt
gggtccataagaattgtttttgaaaaccggttcaaggtaatcaacaatctcctcaatcta
aaaagtcaggtagctacaaaggagaagaaactgaataaagcgaaaaccaaacaacataat
caggtggataagatacagaggtacgaaagagagctttctgccttatcgaatgcggtagat
caagaaactgccaaacgggacatgattgtagacaatgtaaagaaacaactagaaatattt
gaagataagaaagttgatgatttccgttctatggttgaaatatactgggagtcacttatt
gaaacgcaaaaggaaatcattgaactttgggaaactttctacgagaaatgcaaatttgac
taa
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