Komagataella phaffii: PAS_chr3_0993
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Entry
PAS_chr3_0993 CDS
T01092
Name
(RefSeq) Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC)
KO
K14300
nuclear pore complex protein Nup133
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr3_0993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr3_0993
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr3_0993
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PAS_chr3_0993
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PAS_chr3_0993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
MarR_2
Exo84_C
Motif
Other DBs
NCBI-GeneID:
8199738
NCBI-ProteinID:
XP_002493234
UniProt:
C4R669
LinkDB
All DBs
Position
3:1919513..1922962
Genome browser
AA seq
1149 aa
AA seq
DB search
MSSIFAARKEFLDHQTEVSDKSPSSQGGVSDVSDFQLIELTRIDQYSVSKLPSQPAFLRN
YARWDESEHVYEGTVDSQLGYGLVVSNKSVYVWNYNSKETVPVTIAFDVEQKDDIPWKAV
LVDSLPRKFNERASDPGLLLFNSSTGLVKYFEEISSSPSVGILNNKIIEHQLPLSGEFIT
KTDYYKQVGVIVSTSKRRVFLLRLKDSAGKPFISHMEIQHQQTSFLSGLLHRQTYHSYSK
LETPKIVSTKLLKGNLSTNSIVILDSEGSLSIVDCNRDSVSQLVGLNLKDRLTSSLAEVY
PHVGYSFKVHDIAQLEQPSDFLILCSFHKEPITDERYLMLLTIQIQKDDILINASYKINS
HYSNSKETPTLYISSAKNTAFVVSGNSIILMDLFSSIDKITRLERKWEDAVNLKNEISIL
GTSSKNSGPSDGNTLYVLTKQSGILQICRFLSHLSDETENDNILDGMELIKSHIEQAIYY
GGMQTNPLNFDSNKFRDGKEVEKAIIEVADEILLNTSEYLPQFAPVLVDYLKKKGEIMNR
LCQLIAAIKDISDQVKLKVLFDYEKLTTLTSFYQEVSQDSKLTKLLISVINDKYGIQPDD
ALNKFVLYHANDVIDVMKAVFKQCPNQTILKVFDPVALSFLNLESELKYSLFKVSRYSSE
ITLSHPIFLKETGLLLLIDKALQDLPTSKEYHDLLFDVSRFLYYTFNDLILWNRNENQKS
ISEAIQSIFDRKRIVNLLIYLRQHSDILEMAEQFQDFITVLDVLDDQRETINSQIKCDLT
PEIERKQAALLLKFHHFFETYGFHFASTLYQYYIDNHKPKVALLGFPEFDHYLEQFFEQN
SDRLGKLAWIRDLIYKDYFSAAQRLVNEASEDQDEPMAHKKLQLSLAKLSILSIGNSTSL
LENLLENIDINLSLINLQEILAEELSKLIISKKDISKFTQSVQPLMKQSLEKSLERMLDR
KSLTISSLLEVLTLIDPVTNSLEMNCYHAFKVLALLYTSNSTVPYFLKECENLVWKRLLL
KEDWSKLSNTENKSESYISELLEKSSFSRIIKRLVNHGYINTKNPTDSVIRRPSAELLDS
LTKEYTLNEIKVLRSGNGSANEYDYEDDSEENEKLNALRKEYNNESAELKALIEEYEIAD
WIETVMFSQ
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaatattcgcagcaagaaaggaatttctggaccatcagacagaggtcagtgat
aagagcccgagctctcaagggggcgtttcggacgtgagcgattttcaactaattgaactg
acgaggatagatcaatactcagtcagtaaacttccttcgcagcctgcatttttgagaaat
tacgcccgttgggacgaatctgaacatgtttacgaagggactgttgattctcaacttgga
tatggactggtggtgtcaaacaaatctgtttatgtttggaattataatagtaaagaaaca
gtccctgtaacaattgcatttgacgtggaacagaaagatgatataccctggaaggcagtg
ctggtagactccttgccaagaaaattcaatgaaagagctagtgatcctggcttattgcta
ttcaacagctctacgggattggtgaagtacttcgaagagatcagtagttcgccatctgta
gggattctaaacaacaaaattattgaacaccaacttccattaagtggcgagtttatcact
aaaacagattattacaagcaggtaggagtcattgtttctacttcaaaaaggagagtgttt
ttactgcggctcaaagattctgctggcaaaccatttatatcacacatggaaatacaacat
caacaaacgtcatttttgagtggcctgcttcacagacaaacatatcactcatattctaaa
ttggaaacaccgaaaattgtaagcactaagttacttaaagggaatctttccacaaacagc
attgtaatcttagattcagaaggttctctatcaattgtcgattgcaatagagactccgtt
tctcagctggttggcttgaatttgaaagaccgtttaacttcatctttagctgaagtgtat
cctcatgttggttattcattcaaagtccatgacattgcacaactggaacagcccagcgat
tttcttatcttgtgttctttccacaaggaaccaattacagatgaacgatatttgatgctc
ttgacaattcaaattcaaaaagatgatattttaatcaacgcttcgtacaagatcaattct
cattacagcaattccaaagagaccccgacgttatatatttcctcagccaagaacactgct
tttgtcgtgagtggaaactctattattttaatggacctctttagttccatcgataagatt
acaagactggagaggaaatgggaggatgctgtgaacttgaaaaatgagatatcaattctt
ggaacttcttccaagaattcaggccccagtgatggtaacactttatatgttttgacaaaa
cagtctggaattctgcaaatatgtaggtttttgtcacatctttcagacgaaactgaaaat
gacaatatcttggatggtatggaactgataaagtctcacattgagcaggctatatactat
ggcggaatgcaaacaaatccccttaattttgacagcaacaaatttcgggacggaaaggaa
gtcgaaaaggcaatcattgaggttgccgatgagatacttctgaacactagcgagtatctt
ccacaatttgctccagtgctagtcgactacttgaaaaagaagggggaaataatgaaccgg
ctgtgccaattaattgctgccatcaaagatatatcagatcaagttaaactcaaagtgctt
tttgactatgaaaaactcactactttgactagtttttatcaggaagtctcccaggattcc
aaactcacaaagttactcatctcagttataaacgataaatatggcatacaaccagatgat
gctctgaacaaatttgttctttaccatgccaatgatgtcattgacgttatgaaagcagtg
ttcaagcaatgccctaatcagactatcttgaaagtgtttgaccctgtagcattatcgttt
ttgaatttggagagtgaactgaagtacagcttattcaaagtatctcgctattcatctgaa
attactttgtctcacccaatatttttgaaagagactggattactcctactgattgacaag
gccctccaagatcttcccacttccaaggaataccatgacttactgtttgatgtgagtcgt
tttctgtattatactttcaacgatttaattctatggaatagaaatgaaaatcaaaaaagt
atttccgaagcaattcaatccatttttgaccgaaaaagaatagttaacttgctaatttat
ttgcgacagcattcggatattctggaaatggctgaacagtttcaagatttcataaccgtt
ctagacgtactcgacgatcaaagagagactatcaactcacaaatcaagtgcgaccttacg
ccagaaattgaaaggaagcaggccgcactgctcctaaagtttcaccacttttttgagacg
tatggtttccattttgctagcacgttatatcagtactacattgacaatcacaagcccaag
gttgctttattaggattccccgagtttgatcattatttagaacaattttttgaacaaaat
agcgatcgtttaggaaagttagcttggatccgtgacctgatttacaaagattacttttct
gccgcccaaagattggttaatgaagcaagcgaagatcaagacgaaccaatggcccataaa
aagctgcaattgagtttggcaaagcttagcattctgtccattggtaactcgactagctta
cttgagaatttgctggaaaatattgacataaatctctccctgatcaatttgcaggagatt
ttagctgaagagttatcaaagttaatcatctccaaaaaagacatttcgaaattcactcaa
tcagtacaaccattaatgaagcaatcattagaaaagtcattggaacgtatgttagataga
aaatctttgacaatctccagcttgctagaagttttaacattgatcgatccggtaacaaac
tcactggagatgaactgttaccacgcattcaaggttctggcgttgctttacacgtccaat
agtacagttccatatttccttaaggagtgtgaaaaccttgtttggaaaaggcttttactc
aaagaggactggtctaaactgtccaacactgaaaacaaatcagagtcgtacattagtgaa
ctattggagaaatccagcttttcccgcataatcaaaaggttggtcaaccacggctacatt
aacacgaagaacccgactgattctgtcattagaaggccatcagctgagttattggatagt
ttaaccaaagagtacactctcaatgagataaaagttcttcgaagtggaaatggaagtgcc
aatgagtatgactatgaagatgatagtgaggagaatgaaaaactgaacgcattgagaaaa
gagtacaacaatgagagcgccgaattgaaggcacttattgaggaatatgagattgcagat
tggatagagactgtcatgtttagtcaataa
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