Komagataella phaffii: PAS_chr3_1018
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Entry
PAS_chr3_1018 CDS
T01092
Name
(RefSeq) Resident protein of the ER membrane that plays a central role in ER-associated protein degradation
KO
K14023
ERAD-associated E3 ubiquitin-protein ligase component HRD3
Organism
ppa
Komagataella phaffii
Pathway
ppa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PAS_chr3_1018
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GFIT
Motif
Pfam:
Sel1
Motif
Other DBs
NCBI-GeneID:
8199762
NCBI-ProteinID:
XP_002493258
UniProt:
C4R693
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Position
3:complement(1956216..1958258)
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AA seq
680 aa
AA seq
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MFIYLLCCFLACTIADQSYQSQYSTLVKELANAEEISPDDVFSLYSNSQQQLVLESALGR
FLSTGLINEVKNNCTAVNELRKLCDNDHIEALELLADCGIYYNYSVYIPLADSVKYLERL
SQLRVNSEDHFKLGFLYSIGDLNQTSADQGRALLHYQHSADLGNVKAMMALGTRYWHGID
VLKDENLANFYHVAALSKIYPQHEEMVNPVMPFPLENFNIRIPDFHGGLYYEASETPSSM
VRSLDDIHLYENYEYTPADSDLIQIYSLMMSDFLGDYIHPRNYTSAFELAQICVRRADYL
LGESPTELNSVDVWYYTRCHALLGKLYLAGRGTPQNMEAAEKHLIKATLPDIKLPATSKA
YGVFVPLEPSQDLKYLNETKPVPPFKIPRASLSQFTVDFQYGTIDFPSRENLANATIVNV
LNRNYAYLTKPSDEYIVRLGAAKACMPLIEPLASNGMKLALQHFLLGNYRAALVLYLMSA
ELGLETAQTSSAFMLYQKNADIHPILTPLALKNYQRAFLQGNIDAGLYLADALYETKIQG
KDAYLSAYKEVAETNGAQGAYNLANLYEMGKDVPQDFHLAKRYYDLALRRKDHFLPIQLA
LIRLKLKMWYNTYFGSFNSKDEASRVTYPPRFTQIGNNADMFTKMTFLESALTMSFIIGL
ATAVIYKLFMTTARSQNQAQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgttcatctaccttctatgttgtttcttggcctgcacgatagcagatcagtcatatcag
tcacagtactctactttagttaaagaactagcaaacgcggaagagatatctcctgatgat
gtgttctctctatattcgaactcgcagcaacaactagtgctggaatcagcattgggtcgt
tttttgagtactggcctcatcaatgaagtgaaaaataactgcacagccgtcaatgagtta
aggaagctctgtgataatgatcacatcgaagcattagagttacttgcagattgtgggata
tactataactattcagtctatattccattggctgactctgtgaaatatttggaacgactt
tcacaattgagggtcaattctgaagatcacttcaagttgggatttttgtacagtattggg
gatctgaatcaaacttcagccgatcagggtagggctttattacattatcaacactcagcc
gatttaggaaacgttaaagctatgatggcattaggaacacgctactggcatggaattgat
gtcctcaaagatgaaaatttggcaaacttttaccatgtggctgcactctctaagatatac
cctcaacatgaagaaatggttaatccagtaatgccttttccattggagaattttaacatc
cgaattccagattttcatggaggtctctattatgaggcttctgagaccccttcttcaatg
gtcaggtccttagatgatattcatctgtatgaaaattatgagtatacaccagcggatagc
gatctgattcagatatattctttaatgatgtcagattttctgggagactacattcatcca
aggaattatacttcggcttttgagttggcacagatttgtgtccgaagagcagattatctt
ttgggcgaatcaccgacggagctcaactcagtcgatgtttggtattatactcgttgccat
gctctgctagggaagttgtatttggcaggaaggggtactccacaaaatatggaagctgct
gaaaagcatcttattaaggcaactcttccagatatcaagctcccagccacttccaaagct
tatggtgtttttgttccattagaaccttctcaagacttaaagtatcttaacgaaacaaag
ccagttcctccatttaagattcctagagccagtttgagccagttcacagttgattttcaa
tatggaacaattgacttccccagccgggaaaatctggcaaacgcaactatagtaaatgtc
ttgaatcgcaattatgcctatctcactaaaccaagtgatgaatatatagtgcgattaggt
gcggcaaaggcttgtatgcctttgatagaacctttagcgtccaatggtatgaaattagca
ctgcaacatttccttttaggaaactacagggcggcacttgttttgtatcttatgtcagca
gaacttggcttagaaacagcacagacgtcttctgcttttatgctgtatcagaaaaatgca
gatatccatccaatactaaccccactagctttaaaaaactaccaaagagcctttttgcag
ggaaacatcgatgctggtttatacttagctgatgctttatatgaaaccaaaatccagggc
aaagatgcttatttgagtgcctacaaagaagtggccgagacaaatggcgcacagggagca
tataaccttgcaaatttatatgaaatgggaaaagatgtaccacaagattttcatttggcg
aaaagatattatgatttggctcttcgaaggaaagatcatttccttccaattcaattagca
ttaatacggctcaagttgaagatgtggtacaacacttactttggctcatttaactctaaa
gatgaggcatccagagttacgtatcccccaagatttacacaaattggaaacaacgctgat
atgtttaccaaaatgacctttttggagtcagcattaaccatgtcttttattataggacta
gcgactgctgttatttataaactgtttatgactacagcacgatcacaaaaccaagcacag
taa
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