Komagataella phaffii: PAS_chr3_1088
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Entry
PAS_chr3_1088 CDS
T01092
Name
(RefSeq) Pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_chr3_1088
Enzymes [BR:
ppa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PAS_chr3_1088
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PAS_chr3_1088
Prokaryotic type
PAS_chr3_1088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
8199692
NCBI-ProteinID:
XP_002493335
UniProt:
C4R6H0
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Position
3:2107255..2109255
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AA seq
666 aa
AA seq
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MSSLKENRKFTEENASNKRPKLEPQTSLKEKYRLSGIKEPDVGITEYITKDDTGFTGILK
HRYTDFLVNEIDTDGNVIYLENVGFEPKKRPPREANSCKKQDVTPCTIKLSEEHRIKLES
YFGEEDVKKLLALLVTGDNLVSQRTFDDKEQRTKIHKLLREAFYGKLETITSENNRFKIA
LLTKGSRRSKADSVIVEHSLGKPTEFLHVTMLKENKETMEVASTLSRLLKIPVKWISYAG
TKDRRGVTVQRLSLEKMRVERVSHLNKVLRGVKLGSFAYATQPLKLGQLNGNSFLITIKD
VKYSGVLEKILENRLQTLDSSGFVNYFGMQRFGTFSVPTHIVGIQLLQSNWKGAVELLLS
EQELVMQDSIESRKIWKQTHDASLALKTMPSKCNAEYAILKKLSNERKKDGNYTSGSYFN
AIMQIPRNLRIMYGHAYQSFIWNSVASKRIELFGLNVVEGDLVLLTQDETDEDLKHQAND
QFSDENDEGETEDIKKSEYVQAKVVTKQEIESKKYSIFDVVLPTPGFDVIYPSNEILRQV
YIDLMAKDGLDPFLMSRRVREFSYAGTYRRLLGTVNGLEYYVRHYSDNNESLVRTDLELL
KLSGTLNQAEGTHPLLEAKRIVEDKPGDKIAIIVKMQLDVASYATMALRELMRTETSRRG
DTHEEE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagctccttgaaagaaaataggaaattcactgaggaaaatgcttcaaataagaggcct
aaattagaacctcagacttccttaaaagaaaagtacaggctctccggaatcaaggaacca
gatgttggaattactgagtatatcaccaaagatgatacaggtttcacaggaatcttgaag
catagatacacagattttttagttaatgagatagacactgatgggaatgttatatatttg
gagaatgttggttttgagcccaagaagcgacctccgagagaagctaactcttgcaagaag
caagatgtgacgccttgcactatcaagttatctgaggaacatagaataaagcttgaaagt
tattttggcgaggaagatgttaaaaaattattagctttgttagtgactggcgataatctt
gtcagccagcggacattcgacgacaaagagcaaagaactaagatccataaacttttaagg
gaagcgttttatggaaagttagaaacaataacatcagagaataaccggtttaaaattgct
ttgttgactaagggaagtcgtcggagcaaggccgattctgtgattgtggaacatagctta
ggaaagccaaccgaatttttgcatgttacgatgctaaaggagaataaggaaacaatggaa
gttgcgtccacattgagtaggctcctgaaaattcccgtgaaatggatttcctacgcgggg
accaaggatagaagaggagtgactgttcaacggttgtcgctagaaaaaatgcgggttgaa
agggtatcacacttgaataaagttctccgaggagttaaattaggatcattcgcttacgcc
actcagcccttaaagttggggcagcttaatggcaatagcttcttaataaccataaaggat
gtgaaatatagtggtgttttggagaaaatcttggagaacagattacagactctagacagc
tctggctttgtcaattattttggcatgcagcgatttggcacattttctgttccaactcac
atagttgggattcagttgttgcaaagtaactggaagggagccgttgagttacttctttca
gaacaagagctagttatgcaggattcaatagaatctagaaaaatatggaaacaaacacat
gacgcttctcttgctttgaagacgatgccctccaaatgtaatgctgaatatgcgatatta
aaaaaactttctaatgagagaaagaaagatggcaattatacgtcagggtcctatttcaat
gcaattatgcagattccacggaatctcagaattatgtatggacatgcttatcaatcgttt
atctggaatagtgttgcaagcaaaagaatagagctatttgggctaaacgttgttgaaggc
gaccttgtattactaacccaagatgaaacagacgaagatctcaagcaccaagcaaatgat
caattttcggatgaaaatgacgagggtgaaaccgaagacataaaaaagtctgaatatgtg
caagcaaaagttgtaaccaaacaagagattgagtcaaaaaaatactcaatttttgacgtt
gtgttaccgactcccggattcgacgtaatctatcctagcaacgaaatacttcgtcaggtt
tacatcgacctcatggccaaagatggccttgatccttttcttatgtctcgtcgtgtacga
gagttttcctatgctggcacttacagacgtctattaggaaccgtcaatggcttggaatat
tatgtacgacattattcggataacaacgaatcattggtaagaactgacttggagctgtta
aagctttctggtacacttaaccaggctgaaggaactcatcctttactggaagctaagagg
attgtggaagataaaccgggcgataagattgctattatagttaagatgcaattagatgtt
gcatcttatgcaacaatggcgttacgagaactcatgaggacagaaacttctcgtaggggt
gacacccatgaagaagagtaa
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