Komagataella phaffii: PAS_chr3_1105
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Entry
PAS_chr3_1105 CDS
T01092
Name
(RefSeq) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppa
Komagataella phaffii
Pathway
ppa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAS_chr3_1105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr3_1105
Enzymes [BR:
ppa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PAS_chr3_1105
DNA repair and recombination proteins [BR:
ppa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PAS_chr3_1105
Prokaryotic type
PAS_chr3_1105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
8200062
NCBI-ProteinID:
XP_002493350
UniProt:
C4R6I5
LinkDB
All DBs
Position
3:complement(2136957..2137988)
Genome browser
AA seq
343 aa
AA seq
DB search
MTNYKKRISEGIVSSFKKQKILSDFFPTKDIPLNGLQPESGFSSINKKSVLVESSGIVED
STLKKRRSLCSLPREQMPSCAKFDKKKWISGLTDEERQLLDTEITTMDDSWLAVLHEELQ
KPYFLDLKRFLATEECRGVVVFPPRDSWYSWTRLSPLPQIKVLILGQDPYHNYNQAHGLA
FSVKDPKTRIPPSLKNMYKLLKTDYPSFKIPDTADLTQWAQRGVLLLNTCLTVRAHNANS
HSNKGWETFTKAAIQKLIDYNTSKNQGIVVMAWGGPAQRTIDSCRLNGNHLVLKTVHPSP
LSASRGFFDSHHYRKCNEWLVKRYGEDAFIDWSLVKGNVLMNR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattataagaagagaatatccgaaggtattgtgagctcgtttaaaaagcaaaag
attcttagtgattttttccctacaaaagatatacctctgaatggcttgcaaccagagagt
gggtttagttcgattaataaaaagagcgtgttggtggaatcgtcgggcatagtagaagac
agtacattaaaaaaaaggcgtagcttatgctctcttcctagagaacaaatgccatcgtgt
gctaaatttgataaaaaaaaatggatatctgggttgacagatgaggaaagacaacttctg
gacacagaaatcactaccatggatgattcatggctagcagtattacatgaagagctgcaa
aagccgtacttcttagatctcaaaaggtttctagctaccgaagaatgtcgtggtgtagtg
gtatttccacctagagactcgtggtactcatggacacgtttatctccccttccccagatc
aaagttcttattttagggcaagacccgtatcacaattataatcaagcgcatgggttggca
ttttcagtaaaagaccctaaaactagaattcctccctctttgaagaatatgtacaagcta
ctgaagactgattatcccagcttcaaaatcccggatacagcagacttgacccagtgggct
caaaggggagtcttattgttaaacacttgtttgacagtaagagcccacaatgctaattct
cactctaataaaggctgggaaactttcaccaaagctgctatccagaaacttattgactat
aatacttccaagaaccaaggaattgttgtcatggcatggggtgggccagctcagagaacc
attgattcttgccggcttaatggaaatcatttggttctaaagaccgttcatcctagccct
ttgagtgcgtctagaggtttttttgactcccaccattacaggaaatgcaatgaatggctc
gtcaagagatatggcgaagatgctttcattgactggtctcttgtgaagggaaacgtacta
atgaatcgttaa
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