Komagataella phaffii: PAS_chr3_1122
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Entry
PAS_chr3_1122 CDS
T01092
Name
(RefSeq) Subunit of tRNA (1-methyladenosine) methyltransferase with Gcd14p
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_chr3_1122
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
PAS_chr3_1122
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Gcd10p
Motif
Other DBs
NCBI-GeneID:
8200155
NCBI-ProteinID:
XP_002493368
UniProt:
C4R6K3
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Position
3:2164600..2165895
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AA seq
431 aa
AA seq
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MPGCNIIEEGKHVLVRLPSEAVKVVLLKGDSCISLGKFGTFSVSGVLGYKFGQSFEILEN
KLVKPVCSLIDDSKPLLLEDSNTFSENNQNLINTGSLVQKLSTQDIEELKKQGKGQDIIN
QIIAGHDSFGKKTQYSQEKYLKRKQEKFLRRFTIDYLGASEMLQYYRLKDPQRVLDMSNE
SLGLILSYANIRPGGNYILVDETGGVLLYAMLERMENEGSILVAHENEHPNLIALNYSNY
SPELLEKMVSNLNWLQFLEADTQRPQWNNYPQEKIDRLTPPRRSHYLRKKRAADRVNNIL
DTVEQGNFDGLIYASTLYPPTLIPRILDTLGGSRPVVIYSPFKEILSETFHVLQKDYRIL
APSIYETRVRQYQTIIGRIHPLMTTKGGGGYVLHATRVIPKEGGVTAVGRGIKSKRLKLD
DPKVETRQPLE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtgcaatataatagaagaaggcaaacacgttttggttcgtcttccttcagaa
gcggtgaaagtggtactactgaaaggcgactcatgtatctctttgggaaagtttggaaca
ttctcagtttcaggtgtattaggatataagtttgggcaaagctttgaaattttggagaac
aagttggtgaaaccggtttgcagtctcattgacgactcaaaaccgttacttttggaggat
agcaacacgtttagcgagaataatcaaaatctaataaataccggatcgctggttcaaaag
ctaagtactcaagacatcgaagagctcaagaaacaagggaaaggccaagatatcatcaac
caaatcatagctggccatgactcttttgggaagaagactcaatattcccaagaaaaatac
ttgaaacgaaaacaagaaaaatttttacgccgatttactatagattatctcggtgcaagt
gaaatgttacaatattacagacttaaggatcctcaaagggttcttgacatgagcaatgag
tctttgggacttattctgagctatgctaacattcgcccaggtggcaactacatactagtc
gatgaaaccggaggtgttctcctgtatgccatgttagagagaatggaaaatgaaggatca
attttggtagcccatgaaaatgagcaccctaatttaatagcgcttaactactctaactat
tctccagagctactggaaaagatggttagtaatctcaactggttacaatttttggaagcg
gacacacagaggccgcaatggaataactatcctcaagaaaaaattgacaggttaactcct
cctcgtcgctcacattacttacgaaagaaaagggctgctgacagagttaataatattttg
gacactgttgaacaaggaaattttgacggtttgatatacgcatcgacgctatacccccca
actctaattccaaggatactagatactttgggcgggtctcgcccggtagtcatttacagc
ccctttaaggagatcttgagtgaaacgtttcatgttctacagaaagactatagaattctg
gcacctagtatttatgagacgcgtgtgagacagtatcagacaattataggccgaattcac
ccattgatgacaactaaaggaggtggtggttacgttttgcacgccactcgagttatacca
aaagaaggaggtgtaactgcagttggaagaggaatcaaaagcaaacggttgaagttggac
gaccccaaagtagagacgagacaaccgttggaatga
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