Komagataella phaffii: PAS_chr3_1204
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Entry
PAS_chr3_1204 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr3_1204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr3_1204
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PAS_chr3_1204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
8199829
NCBI-ProteinID:
XP_002492855
UniProt:
C4R540
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All DBs
Position
3:complement(1192974..1195736)
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AA seq
920 aa
AA seq
DB search
MPSVEDKALVGGTKSQLKELLVSSRNLPKTLTDISPIHLGLSAIQRKAHTLRKYKDDNQR
YTRAHYLLAGSGISAEEIETDLLEISVPQTLDVAMGQKNYADLSNGIDTYIESKKEENIL
AAIEQSLTMAAKDFDAYVAQNISMDWNQRKKELRESFDIILNGTSKEPSNELVEYTQFGN
ASKKFKSDPNLTWSANKPILANRVEFTDVEVSSTLPTNVLNPSVSYALRQKFEEYAQAIY
ELNAARQNNKPYELTNVFAQITKQANDIKSRQLYETWKILYHLVDFNEPAAFQERKFVKG
HDSEVLDSFEAIALRKRIIERSRSYLEQQFMDYIDSIYIRLSNKEESKLNTPETPIVDNV
TKVKLFVEHRYKKEDTWKIQNLLFINGLPIWAIIFYLLRAGCLDDALNLTLKNSDSFTKV
ERSFPTYLKAYVNSSDRGFNQELHGRLINEFNQFFKHMNKEADPFRYAVYKLISRCELSR
KNLPYITLSVEDWLWVHFTLCREGTNDDDPIYERYSLLDLQKTVLKLGPDNFNGSFNNPL
YLQTLIFTGLYEHAVQYFYSISEIDSVHLAIALYYCGLLRSTTDKSNTTQLLTYRGERNI
PEINFARLIGTYTRTFKISDPRVAVEYLILICLGGDLPDGRGKEQIELGLSSIRELVLET
REFSLLLGKIDREGFRVPGIIEERKNLLHLPDKESFLRKITEQAAIKADDEGRVFDSLLL
YQLSENYDTVISLINKLLGDLLASTDLETAIDTPAERAAEGSIIALAERLMKQYSSSTEI
SGKVLLKHRETCSLLLKMVECRDLFVKQEWEKALKQIGQLDMLPIVAGVNVAVARSKVEV
FNSYDESVAKNVPDLLVMTLTCIAQLTYQLTSSEFNGLVKSDKIKYLKEVARNCMLYAGI
LQYKMPRETYSMLVSLESML
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgtcgaagacaaagccctcgttggaggcaccaaatcccaattgaaagaactg
ctggtttcctcacgcaacctgccgaaaactctcaccgatatcagtcccatccatttagga
ctaagtgccatccaaagaaaagctcatactttgaggaagtacaaggatgataatcagcgc
tacaccagggcacattatctacttgcaggaagtggtatttctgcggaagaaatagagacg
gacttacttgaaatttcagttcctcaaactttggatgttgctatggggcagaaaaattat
gctgacttgagcaacggaattgacacttatatcgaatctaagaaggaggagaatattttg
gctgctattgagcaatctttgactatggctgccaaggattttgatgcttatgtggctcaa
aatatatctatggattggaatcaaagaaaaaaggagttaagagaaagttttgacataata
ttgaatggcacttccaaagagcccagcaacgaattagttgaatatacacagtttggcaat
gcttctaagaaattcaagtcggatcccaacttgacctggtctgccaataaaccaatttta
gccaaccgagttgaatttactgatgtcgaagtttcttctaccctcccaactaacgtttta
aatccaagcgtgtcttatgctttgagacaaaagtttgaagagtatgctcaagcaatttac
gaattgaatgccgcaagacaaaataataaaccctatgaactaaccaatgtcttcgctcag
attaccaaacaagctaacgatatcaaatccagacaattgtacgagacatggaagatactc
tatcatttggtcgattttaacgaaccagcagcttttcaagagagaaagtttgtgaagggc
catgacagtgaggtcttagactcttttgaggccattgctttgagaaagagaatcatagaa
agaagcaggtcatacttggagcaacaatttatggattatattgattccatatacattcga
ctcagcaacaaagaagaatcgaaattgaacacaccagagacaccaatagtggataatgtt
acgaaagtaaagctttttgtcgaacacagatacaagaaggaagatacatggaagattcaa
aacctcctattcataaacggtttacctatttgggctatcattttttatttactgagagct
ggttgtttagatgatgctttgaacttaactttgaagaacagcgattcctttactaaagtt
gagcggtcttttccgacatatttaaaggcctatgtgaattcatctgacagaggtttcaac
caagagcttcatggtcggctcattaacgaatttaaccagtttttcaagcacatgaacaaa
gaagcagatccctttagatatgctgtatacaagttgatcagtagatgcgagctttcaaga
aagaatcttccctatatcactctaagtgtggaagattggttatgggtccattttacgtta
tgcagagagggtactaacgatgatgatcctatttatgaaaggtacagtttactggacttg
caaaagactgtcctcaagctaggccctgacaattttaatggctcattcaataacccacta
tatcttcaaactttgatcttcacaggattatatgaacatgcggtacagtatttctactct
attagtgagattgattctgttcatttagccattgccctttactattgtggactcttgcgc
tccaccacagacaagagtaataccactcagttactcacgtacagaggggaaagaaatatt
ccagaaataaactttgctcgactgattggaacctatactagaactttcaagatttctgac
cccagagttgctgtggaatatctgatactgatttgtttaggtggagatcttccagatggt
cgtggaaaagagcagattgaattgggactttccagtattagagagctagtgcttgagacc
agagagttttcgttattgcttggaaagatcgacagagagggattcagggttccaggaata
atagaagagagaaaaaacttattgcatcttcctgacaaagaatcgttcttgcgcaagatc
acagaacaggctgccatcaaagctgatgatgagggtcgtgtattcgattccttgttacta
taccaattaagtgaaaactacgatactgtgatatctttaatcaacaaactattgggtgat
ttactggcatctactgaccttgaaacagcgatcgatacgcccgcagaacgagcagctgaa
ggaagcatcatagcattagctgaaaggttgatgaaacaatatagtagttcaacagagatt
agcggaaaagttctactaaagcacagagaaacttgctcgctgctcctcaaaatggttgag
tgccgtgacctttttgtgaaacaggaatgggagaaggcgctgaaacaaatcggacagcta
gatatgcttccaattgtggcaggagttaatgttgccgtcgcccgaagtaaagttgaagtt
tttaacagttatgatgaaagtgtggccaaaaacgttcctgatctattggttatgacttta
acatgtattgcacaattaacgtatcaacttacatcgagcgagttcaatggattggtcaag
agtgacaagatcaaatacctcaaagaagttgcacgaaattgtatgttgtatgctggaatc
ttacaatataaaatgcccagagaaacctatagtatgctggtcagtttagaaagtatgcta
tga
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